RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 DTX1Q86Y01 620 aa18.04■□□□□ 0.48
CASC4-209ENST00000559222 UHMK1Q8TAS1 419 aaKnown RBP18.04■□□□□ 0.48
CASC4-209ENST00000559222 ZNF480Q8WV37 535 aa18.04■□□□□ 0.48
CASC4-209ENST00000559222 CDKL2Q92772 493 aa18.04■□□□□ 0.48
CASC4-209ENST00000559222 ZNF501Q96CX3 271 aaPredicted RBP18.04■□□□□ 0.48
CASC4-209ENST00000559222 CPNE1Q99829 537 aa18.04■□□□□ 0.48
CASC4-209ENST00000559222 FGF21Q9NSA1 209 aa18.04■□□□□ 0.48
CASC4-209ENST00000559222 WDR70Q9NW82 654 aa18.04■□□□□ 0.48
CASC4-209ENST00000559222 NSMCE4AQ9NXX6 385 aa18.04■□□□□ 0.48
CASC4-209ENST00000559222 SPATA7Q9P0W8 599 aa18.04■□□□□ 0.48
CASC4-209ENST00000559222 PDE10AQ9Y233 779 aa18.04■□□□□ 0.48
CASC4-209ENST00000559222 LAMA5O15230 3695 aa18.04■□□□□ 0.48
CASC4-209ENST00000559222 PKD1L2Q7Z442 2459 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 ESPNB1AK53 854 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 EIF3FO00303 357 aaPredicted RBP18.03■□□□□ 0.48
CASC4-209ENST00000559222 PHGDHO43175 533 aaKnown RBP18.03■□□□□ 0.48
CASC4-209ENST00000559222 STK17BO94768 372 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 DLGAP3O95886 979 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 LIPCP11150 499 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 WT1P19544 449 aaPredicted RBP18.03■□□□□ 0.48
CASC4-209ENST00000559222 IMPA1P29218 277 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 SKIV2L2P42285 1042 aaKnown RBP18.03■□□□□ 0.48
CASC4-209ENST00000559222 FCRL6Q6DN72 434 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 PWWP2BQ6NUJ5 590 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 RELL1Q8IUW5 271 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 LRRC56Q8IYG6 542 aaPredicted RBP18.03■□□□□ 0.48
CASC4-209ENST00000559222 CARFQ8N187 725 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 MYO1HQ8N1T3 1032 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 SPATA6LQ8N4H0 392 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 FBXO15Q8NCQ5 510 aaPredicted RBP18.03■□□□□ 0.48
CASC4-209ENST00000559222 OR1L3Q8NH93 324 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 HMGCLL1Q8TB92 370 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 GPR22Q99680 433 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 MIPEPQ99797 713 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 ACAT2Q9BWD1 397 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 FAM129AQ9BZQ8 928 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 B3GNT4Q9C0J1 378 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 PILRAQ9UKJ1 303 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 AHCTF1Q8WYP5 2266 aa18.03■□□□□ 0.48
CASC4-209ENST00000559222 FER1L5A0AVI2 2057 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 NPEPPSL1A6NEC2 478 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.02■□□□□ 0.48
CASC4-209ENST00000559222 CDC7O00311 574 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 KDM1AO60341 852 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 SPAG6O75602 509 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 KIAA0754O94854 1291 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 OAS2P29728 719 aaKnown RBP18.02■□□□□ 0.48
CASC4-209ENST00000559222 RGS4P49798 205 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 PNLIPRP1P54315 467 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 IL2P60568 153 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 TSTA3Q13630 321 aaPredicted RBP18.02■□□□□ 0.48
CASC4-209ENST00000559222 BMPR2Q13873 1038 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 ZXDCQ2QGD7 858 aaPredicted RBP18.02■□□□□ 0.48
CASC4-209ENST00000559222 COL28A1Q2UY09 1125 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 CMC1Q7Z7K0 106 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 OR2A1Q8NGT9 310 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 MAGEC3Q8TD91 643 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 NKD1Q969G9 470 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 RAB11FIP5Q9BXF6 653 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 ASPSCR1Q9BZE9 553 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 CPNE5Q9HCH3 593 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 SLC6A20Q9NP91 592 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 ABCF3Q9NUQ8 709 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 RARRES3Q9UL19 164 aa18.02■□□□□ 0.48
CASC4-209ENST00000559222 ATRXP46100 2492 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 HMX2A2RU54 273 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 TMEM150CB9EJG8 249 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 STMND1H3BQB6 276 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 RRP8O43159 456 aaKnown RBP18.01■□□□□ 0.47
CASC4-209ENST00000559222 EFSO43281 561 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 RAD1O60671 282 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 TUBB4BP68371 445 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 ACY1Q03154 408 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 USP10Q14694 798 aaKnown RBP18.01■□□□□ 0.47
CASC4-209ENST00000559222 SF1Q15637 639 aaKnown RBP18.01■□□□□ 0.47
CASC4-209ENST00000559222 SBSNQ6UWP8 590 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 PPP1R3BQ86XI6 285 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 IFT20Q8IY31 132 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 GALNT6Q8NCL4 622 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 TEFMQ96QE5 360 aaKnown RBP18.01■□□□□ 0.47
CASC4-209ENST00000559222 SLC12A9Q9BXP2 914 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 ULBP3Q9BZM4 244 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 SYNPO2LQ9H987 977 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 AKIRIN1Q9H9L7 192 aaPredicted RBP18.01■□□□□ 0.47
CASC4-209ENST00000559222 PDE7BQ9NP56 450 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 STOX2Q9P2F5 926 aaPredicted RBP18.01■□□□□ 0.47
CASC4-209ENST00000559222 TXNDC16Q9P2K2 825 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 SH2B3Q9UQQ2 575 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 SSUH2Q9Y2M2 353 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 TMEM184BQ9Y519 407 aaPredicted RBP18.01■□□□□ 0.47
CASC4-209ENST00000559222 PCDHB11Q9Y5F2 797 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 HEATR5BQ9P2D3 2071 aa18.01■□□□□ 0.47
CASC4-209ENST00000559222 E7ENX8 843 aa18■□□□□ 0.47
CASC4-209ENST00000559222 ZBTB14O43829 449 aa18■□□□□ 0.47
CASC4-209ENST00000559222 NTRK1P04629 796 aa18■□□□□ 0.47
CASC4-209ENST00000559222 C8GP07360 202 aa18■□□□□ 0.47
CASC4-209ENST00000559222 CD82P27701 267 aa18■□□□□ 0.47
CASC4-209ENST00000559222 MAP4P27816 1152 aaKnown RBP18■□□□□ 0.47
CASC4-209ENST00000559222 GRIA3P42263 894 aa18■□□□□ 0.47
CASC4-209ENST00000559222 TAP2Q03519 686 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms