RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 IFRD1O00458 451 aaPredicted RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 PRMT5O14744 637 aaPredicted RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 VAPBO95292 243 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 MLNP12872 115 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 ITGB6P18564 788 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 NELFEP18615 380 aaKnown RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 WT1P19544 449 aaPredicted RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 NDUFS1P28331 727 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 CCR7P32248 378 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 ARCN1P48444 511 aaKnown RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 TTPAP49638 278 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 KPNA2P52292 529 aaKnown RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 PTK6Q13882 451 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 DCAF12Q5T6F0 453 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 RNASEH2BQ5TBB1 312 aaKnown RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 ARHGAP40Q5TG30 622 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 CACHD1Q5VU97 1274 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 ARMC3Q5W041 872 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 KIAA0930Q6ICG6 404 aaPredicted RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 CDPF1Q6NVV7 123 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 KLHL35Q6PF15 583 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 INO80CQ6PI98 192 aaPredicted RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 CEACAM20Q6UY09 585 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 GPR155Q7Z3F1 870 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 OOSP2Q86WS3 158 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 VRK3Q8IV63 474 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 KRT222Q8N1A0 295 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 NAT8LQ8N9F0 302 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 ACVR1CQ8NER5 493 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR4E2Q8NGC2 313 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR52E1Q8NGJ3 308 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR5AR1Q8NGP9 310 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 GRK7Q8WTQ7 553 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 SNRNP27Q8WVK2 155 aaKnown RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 TFGQ92734 400 aaPredicted RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 SLCO2A1Q92959 643 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 RNF31Q96EP0 1072 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZDHHC12Q96GR4 267 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 SLC41A2Q96JW4 573 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 CAPZA3Q96KX2 299 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 PPM1MQ96MI6 270 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 TEFMQ96QE5 360 aaKnown RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 TTC1Q99614 292 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 NAPGQ99747 312 aaPredicted RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 HGH1Q9BTY7 390 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 ASPSCR1Q9BZE9 553 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 XAB2Q9HCS7 855 aaKnown RBP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 HRASLS2Q9NWW9 162 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 IL1RAPL1Q9NZN1 696 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 PILRAQ9UKJ1 303 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 CDYLQ9Y232 598 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 COLEC10Q9Y6Z7 277 aa5.84□□□□□ -1.47
CTDSPL2-204ENST00000558966 COL6A6A6NMZ7 2263 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 ZCWPW2A0A1B0GU75 182 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 TEX51A0A1B0GUA7 166 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 FAM237BA0A1B0GVD1 139 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 BTN3A3O00478 584 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 BTN3A1O00481 513 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 POLR1CO15160 346 aaPredicted RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 SUSD5O60279 629 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 GPC4O75487 556 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 TPBGLP0DKB5 382 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 ZNF28P17035 718 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 POLR2CP19387 275 aaPredicted RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 COL8A1P27658 744 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 AOAHP28039 575 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 CSE1LP55060 971 aaKnown RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 SARNPP82979 210 aaKnown RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 FOXM1Q08050 763 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 PRKG2Q13237 762 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 KRT33BQ14525 404 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 KCNAB1Q14722 419 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 TYSND1Q2T9J0 566 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 ANKRD20A4Q4UJ75 823 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 SYTL3Q4VX76 610 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 SOWAHCQ53LP3 525 aaPredicted RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 CTSL3PQ5NE16 218 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 DNTTIP2Q5QJE6 756 aaKnown RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 CASC4Q6P4E1 433 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 FBXO38Q6PIJ6 1188 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 PCSK4Q6UW60 755 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 TIPARPQ7Z3E1 657 aaKnown RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 PPIL6Q8IXY8 311 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 SLC22A15Q8IZD6 547 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 ADGRF3Q8IZF5 1079 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 C17orf53Q8N3J3 647 aaPredicted RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 LCN9Q8WX39 176 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 LPGAT1Q92604 370 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 ZNF669Q96BR6 464 aaPredicted RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 SIGLEC10Q96LC7 697 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 OR6C1Q96RD1 312 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 UBL7Q96S82 380 aaPredicted RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 CD180Q99467 661 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 CARD6Q9BX69 1037 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 TFB2MQ9H5Q4 396 aaKnown RBP5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 XKR8Q9H6D3 395 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 MVB12BQ9H7P6 319 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 SAMD15Q9P1V8 674 aa5.83□□□□□ -1.48
CTDSPL2-204ENST00000558966 SUCOQ9UBS9 1254 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms