RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ARHGAP22Q7Z5H3 698 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 TRIM73Q86UV7 250 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 FLVCR1-AS1Q8TAF5 88 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 HMGCLL1Q8TB92 370 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 EXT2Q93063 718 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 KIAA1191Q96A73 305 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 LIN37Q96GY3 246 aaPredicted RBP16.86■□□□□ 0.29
TPM1-214ENST00000558544 OR2A14Q96R47 310 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 CD180Q99467 661 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 TWSG1Q9GZX9 223 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 ABCF3Q9NUQ8 709 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 ZNF358Q9NW07 568 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 RNF112Q9ULX5 631 aa16.86■□□□□ 0.29
TPM1-214ENST00000558544 IGHV5-51A0A0C4DH38 117 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 A0A1W2PPV9 198 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 MED19A0JLT2 244 aaPredicted RBP16.85■□□□□ 0.29
TPM1-214ENST00000558544 ZNF839A8K0R7 811 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 GOLGA8RI6L899 631 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 ANKRD34CP0C6C1 535 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 KRT15P19012 456 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 LSSP48449 732 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 RASA2Q15283 850 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 C3orf38Q5JPI3 329 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 AGTRAPQ6RW13 159 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 ERMP1Q7Z2K6 904 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 ISCA2Q86U28 154 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 GPSM1Q86YR5 675 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 FAM20CQ8IXL6 584 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 LRRC56Q8IYG6 542 aaPredicted RBP16.85■□□□□ 0.29
TPM1-214ENST00000558544 RIBC1Q8N443 379 aaPredicted RBP16.85■□□□□ 0.29
TPM1-214ENST00000558544 SMPDL3AQ92484 453 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 CABS1Q96KC9 395 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 EGFL8Q99944 293 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 ROPN1BQ9BZX4 212 aaPredicted RBP16.85■□□□□ 0.29
TPM1-214ENST00000558544 ATG10Q9H0Y0 220 aa16.85■□□□□ 0.29
TPM1-214ENST00000558544 ROPN1Q9HAT0 212 aaPredicted RBP16.85■□□□□ 0.29
TPM1-214ENST00000558544 CCDC187A0A096LP49 1063 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 A0A1W2PPM1 405 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 PMS2P1A4D2B8 440 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 NCF1BA6NI72 391 aaPredicted RBP16.84■□□□□ 0.29
TPM1-214ENST00000558544 NCF1CA8MVU1 366 aaPredicted RBP16.84■□□□□ 0.29
TPM1-214ENST00000558544 E7ENX8 843 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 HGSO14964 777 aaPredicted RBP16.84■□□□□ 0.29
TPM1-214ENST00000558544 TOX3O15405 576 aaPredicted RBP16.84■□□□□ 0.29
TPM1-214ENST00000558544 PRICKLE3O43900 615 aaPredicted RBP16.84■□□□□ 0.29
TPM1-214ENST00000558544 MT-ND3P03897 115 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 NCF1P14598 390 aaPredicted RBP16.84■□□□□ 0.29
TPM1-214ENST00000558544 PVRP15151 417 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 OAS2P29728 719 aaKnown RBP16.84■□□□□ 0.29
TPM1-214ENST00000558544 TBPL1P62380 186 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 TAP2Q03519 686 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 TGFBIQ15582 683 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 KLC3Q6P597 504 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 CLEC14AQ86T13 490 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 CNPY4Q8N129 248 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 HNRNPLLQ8WVV9 542 aaKnown RBP16.84■□□□□ 0.29
TPM1-214ENST00000558544 SLC22A18Q96BI1 424 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 ALKBH8Q96BT7 664 aaKnown RBP16.84■□□□□ 0.29
TPM1-214ENST00000558544 FBXL8Q96CD0 374 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 GRAMD1AQ96CP6 724 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 MED8Q96G25 268 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 TSNARE1Q96NA8 513 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 GPR78Q96P69 363 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 ZIM3Q96PE6 472 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 ACAT2Q9BWD1 397 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 KLHL25Q9H0H3 589 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 ZNF768Q9H5H4 540 aaKnown RBP16.84■□□□□ 0.29
TPM1-214ENST00000558544 C1GALT1Q9NS00 363 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 SATB2Q9UPW6 733 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 LOXL2Q9Y4K0 774 aa16.84■□□□□ 0.29
TPM1-214ENST00000558544 ASPMQ8IZT6 3477 aa16.83■□□□□ 0.29
TPM1-214ENST00000558544 A0A0J9YY10 115 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 A0A1W2PNU3 283 aaPredicted RBP16.83■□□□□ 0.28
TPM1-214ENST00000558544 SLC9B1P1A6NJY1 282 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 KERAO60938 352 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 ANXA5P08758 320 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 PYGBP11216 843 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 HGFP14210 728 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 ST6GAL1P15907 406 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 CSTF2P33240 577 aaKnown RBP eCLIP16.83■□□□□ 0.28
TPM1-214ENST00000558544 RPA3P35244 121 aaPredicted RBP16.83■□□□□ 0.28
TPM1-214ENST00000558544 KCNC1P48547 511 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 CDKL1Q00532 357 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 ZNF844Q08AG5 666 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 NAE1Q13564 534 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 ACAP2Q15057 778 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 SF1Q15637 639 aaKnown RBP16.83■□□□□ 0.28
TPM1-214ENST00000558544 SLC5A12Q1EHB4 618 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 KRT71Q3SY84 523 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 FOXR1Q6PIV2 292 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 RAB11FIP2Q7L804 512 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 AGBL5Q8NDL9 886 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 STAG3L4Q8TBR4 150 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 ATL1Q8WXF7 558 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 ZBTB9Q96C00 473 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 ATOH8Q96SQ7 321 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 CMKLR1Q99788 373 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 MIPEPQ99797 713 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 TMEM109Q9BVC6 243 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 PITPNM3Q9BZ71 974 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms