RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 RASGEF1CQ8N431 466 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 SETD7Q8WTS6 366 aaKnown RBP13.69□□□□□ -0.22
SPG11-210ENST00000558319 NANSQ9NR45 359 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 SLC22A1O15245 554 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 TBX10O75333 385 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 ATAT1Q5SQI0 421 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 GALNT7Q86SF2 657 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 MARCH9Q86YJ5 346 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 CENPSQ8N2Z9 138 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 PCED1BQ96HM7 432 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 FKBPLQ9UIM3 349 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 TCAF2A6NFQ2 919 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 SPATA31C2B4DYI2 1134 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 PCDHGA12O60330 932 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 BPNT1O95861 308 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 ZNF14P17017 642 aaPredicted RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 IRF9Q00978 393 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 SLC3A1Q07837 685 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 MTFR2Q6P444 385 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 C11orf65Q8NCR3 313 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 C1orf216Q8TAB5 229 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 STON2Q8WXE9 905 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
SPG11-210ENST00000558319 SLC39A3Q9BRY0 314 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 RC3H2Q9HBD1 1191 aaKnown RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 CDH7Q9ULB5 785 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 IDSP22304 550 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 IQCCQ4KMZ1 466 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 BRMS1LQ5PSV4 323 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 ZNF662Q6ZS27 426 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 SLC26A9Q7LBE3 791 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 NCDNQ9UBB6 729 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 MAGEB17A8MXT2 336 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 RPLP2P05387 115 aaKnown RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 PRDX6P30041 224 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 RHEBQ15382 184 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 PLEKHG6Q3KR16 790 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 FAM174BQ3ZCQ3 159 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 LRRC37A5PQ49AS3 106 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 INTS6LQ5JSJ4 861 aaKnown RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 MLIPQ5VWP3 458 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 ZCCHC12Q6PEW1 402 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 XKRXQ6PP77 449 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 MMAAQ8IVH4 418 aaKnown RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 OR5K1Q8NHB7 308 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 HEXDCQ8WVB3 486 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 KCTD7Q96MP8 289 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 DPAGT1Q9H3H5 408 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 GLOD4Q9HC38 313 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 HYKKA2RU49 373 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 RPP14O95059 124 aaKnown RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 SLC6A4P31645 630 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 RPL19P84098 196 aaKnown RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 RBM20Q5T481 1227 aaKnown RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 ANO7Q6IWH7 933 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 CYP4V2Q6ZWL3 525 aaPredicted RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 CTU1Q7Z7A3 348 aaKnown RBP13.68□□□□□ -0.22
SPG11-210ENST00000558319 HMGN2P46Q86SG4 172 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 DTX3Q8N9I9 347 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 CSPG4P5Q96PW8 444 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 MKLN1Q9UL63 735 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 COLEC10Q9Y6Z7 277 aa13.68□□□□□ -0.22
SPG11-210ENST00000558319 SMIM28A0A1B0GU29 152 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 GNRH1P01148 92 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 SPATA31C1P0DKV0 1188 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 SPAM1P38567 509 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 RPS3AP61247 264 aaKnown RBP13.67□□□□□ -0.22
SPG11-210ENST00000558319 SLC25A52Q3SY17 297 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 TCEAL6Q6IPX3 200 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 NIPAL1Q6NVV3 410 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 P4HA3Q7Z4N8 544 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 CPNE9Q8IYJ1 553 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 TRPS1Q9UHF7 1281 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 UBIAD1Q9Y5Z9 338 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 CDRT1O95170 752 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 CYP11A1P05108 521 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 C8orf89P0DMQ9 161 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 RAP2AP10114 183 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 SELPP16109 830 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 HK1P19367 917 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 ACVR2AP27037 513 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 CMPK1P30085 196 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 RBM34P42696 430 aaKnown RBP13.67□□□□□ -0.22
SPG11-210ENST00000558319 SLC15A1P46059 708 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 TBC1D25Q3MII6 688 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 ANKDD1AQ495B1 522 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 GXYLT1Q4G148 440 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 NIPA1Q7RTP0 329 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 COMTD1Q86VU5 262 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 PAQR7Q86WK9 346 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 SDR16C5Q8N3Y7 309 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 THAP6Q8TBB0 222 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 FUZQ9BT04 418 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 TRMOQ9BU70 441 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 SPATA9Q9BWV2 254 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 PRDM16Q9HAZ2 1276 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 PIK3C2BO00750 1634 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 TGFB1P01137 390 aa13.67□□□□□ -0.22
SPG11-210ENST00000558319 ACP5P13686 325 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms