RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 HIF1AQ16665 826 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 ZC3H12BQ5HYM0 836 aaKnown RBP15.29■□□□□ 0.04
SCFD1-224ENST00000557713 YOD1Q5VVQ6 348 aaPredicted RBP15.29■□□□□ 0.04
SCFD1-224ENST00000557713 FIGLAQ6QHK4 219 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 KIRREL2Q6UWL6 708 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 KCNMB4Q86W47 210 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 ST6GALNAC3Q8NDV1 305 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 CFAP61Q8NHU2 1237 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 PPP4R1Q8TF05 950 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.29■□□□□ 0.04
SCFD1-224ENST00000557713 WDR77Q9BQA1 342 aaPredicted RBP15.29■□□□□ 0.04
SCFD1-224ENST00000557713 CUTCQ9NTM9 273 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.29■□□□□ 0.04
SCFD1-224ENST00000557713 CDC23Q9UJX2 597 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 HS3ST3B1Q9Y662 390 aa15.29■□□□□ 0.04
SCFD1-224ENST00000557713 CELSR2Q9HCU4 2923 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 SNRNP200O75643 2136 aaKnown RBP15.28■□□□□ 0.04
SCFD1-224ENST00000557713 PCM1Q15154 2024 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 FITM1A5D6W6 292 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 RASGRF2O14827 1237 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 ALOX12BO75342 701 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 GAS8O95995 478 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 MCM3P25205 808 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 AOAHP28039 575 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 GRM7Q14831 915 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 SF1Q15637 639 aaKnown RBP15.28■□□□□ 0.04
SCFD1-224ENST00000557713 OASLQ15646 514 aaKnown RBP15.28■□□□□ 0.04
SCFD1-224ENST00000557713 FASTKD1Q53R41 847 aaKnown RBP15.28■□□□□ 0.04
SCFD1-224ENST00000557713 TCTE1Q5JU00 501 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 NLRP9Q7RTR0 991 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 DCUN1D3Q8IWE4 304 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 SYCE1Q8N0S2 351 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 OR6P1Q8NGX9 317 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 ATG4AQ8WYN0 398 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 ZUFSPQ96AP4 578 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 HES6Q96HZ4 224 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 TSSK1BQ9BXA7 367 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 MRM3Q9HC36 420 aaKnown RBP15.28■□□□□ 0.04
SCFD1-224ENST00000557713 AGPAT4Q9NRZ5 378 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 INTS7Q9NVH2 962 aaKnown RBP15.28■□□□□ 0.04
SCFD1-224ENST00000557713 NOVA2Q9UNW9 492 aaKnown RBP15.28■□□□□ 0.04
SCFD1-224ENST00000557713 NUP210LQ5VU65 1888 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 CENPEQ02224 2701 aa15.28■□□□□ 0.04
SCFD1-224ENST00000557713 VSTM2BA6NLU5 285 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 TARM1B6A8C7 271 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 FTCDO95954 541 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 APOA4P06727 396 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 PPARGP37231 505 aaPredicted RBP15.27■□□□□ 0.04
SCFD1-224ENST00000557713 FDFT1P37268 417 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 TSFMP43897 325 aaKnown RBP15.27■□□□□ 0.04
SCFD1-224ENST00000557713 ZNF75DP51815 510 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 AGAP7PQ5VUJ5 663 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 PPP1R21Q6ZMI0 780 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 SHISA6Q6ZSJ9 500 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 LDB1Q86U70 411 aaPredicted RBP15.27■□□□□ 0.04
SCFD1-224ENST00000557713 TAX1BP1Q86VP1 789 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 PARP9Q8IXQ6 854 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 KRT222Q8N1A0 295 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 DNAJB14Q8TBM8 379 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 PEX13Q92968 403 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 MRFAP1L1Q96HT8 127 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 AGAP4Q96P64 663 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 IL1RAPL1Q9NZN1 696 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 NXT1Q9UKK6 140 aaKnown RBP15.27■□□□□ 0.04
SCFD1-224ENST00000557713 SLC39A10Q9ULF5 831 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 TCAF1Q9Y4C2 921 aa15.27■□□□□ 0.04
SCFD1-224ENST00000557713 MYO9AB2RTY4 2548 aa15.27■□□□□ 0.03
SCFD1-224ENST00000557713 ANKRD12Q6UB98 2062 aa15.27■□□□□ 0.03
SCFD1-224ENST00000557713 A0A0U1RQJ8 604 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 LIASO43766 372 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 SRPX2O60687 465 aaPredicted RBP15.26■□□□□ 0.03
SCFD1-224ENST00000557713 CTSVO60911 334 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 FKBP9O95302 570 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 OR1D4P47884 311 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 PRAMEP78395 509 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 Q0VFX4 171 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 FAM214AQ32MH5 1076 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 TUBB8Q3ZCM7 444 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 KIAA1328Q86T90 577 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 TTC29Q8NA56 475 aaPredicted RBP15.26■□□□□ 0.03
SCFD1-224ENST00000557713 OR11G2Q8NGC1 345 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 COG1Q8WTW3 980 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 SELENOSQ9BQE4 189 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 LHPPQ9H008 270 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 P2RY12Q9H244 342 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 SOX17Q9H6I2 414 aaPredicted RBP15.26■□□□□ 0.03
SCFD1-224ENST00000557713 CHRAC1Q9NRG0 131 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 SEMA3GQ9NS98 782 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 MARCH4Q9P2E8 410 aaPredicted RBP15.26■□□□□ 0.03
SCFD1-224ENST00000557713 CTSFQ9UBX1 484 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 KLK4Q9Y5K2 254 aa15.26■□□□□ 0.03
SCFD1-224ENST00000557713 CRYBG3Q68DQ2 2970 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 E2F3O00716 465 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 PRMT5O14744 637 aaPredicted RBP15.25■□□□□ 0.03
SCFD1-224ENST00000557713 MED26O95402 600 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 ETS1P14921 441 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 VSX2P58304 361 aaPredicted RBP15.25■□□□□ 0.03
SCFD1-224ENST00000557713 KIF5AQ12840 1032 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 ZNF169Q14929 603 aaPredicted RBP15.25■□□□□ 0.03
SCFD1-224ENST00000557713 CCSMST1Q4G0I0 132 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms