RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SCUBE1Q8IWY4 988 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 TBC1D21Q8IYX1 336 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 RAB42Q8N4Z0 105 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 PHC3Q8NDX5 983 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 FAM13CQ8NE31 585 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 SPDYE1Q8NFV5 336 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-233ENST00000557529 OR5K2Q8NHB8 316 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 HMGCLL1Q8TB92 370 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 SETD7Q8WTS6 366 aaKnown RBP12.11□□□□□ -0.47
SHMT2-233ENST00000557529 TSPEARQ8WU66 669 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 SELENOMQ8WWX9 145 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 RCN3Q96D15 328 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 WDR92Q96MX6 357 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 FRG2BQ96QU4 278 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 BRINP2Q9C0B6 783 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 OSGEPL1Q9H4B0 414 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 CCDC177Q9NQR7 707 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-233ENST00000557529 NOP53Q9NZM5 478 aaKnown RBP12.11□□□□□ -0.47
SHMT2-233ENST00000557529 ZIM2Q9NZV7 527 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 CCDC167Q9P0B6 97 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 SPATA7Q9P0W8 599 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 SUFUQ9UMX1 484 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 PSMD13Q9UNM6 376 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 DMTF1Q9Y222 760 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 GPSM3Q9Y4H4 160 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 CCL27Q9Y4X3 112 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 ZFC3H1O60293 1989 aaKnown RBP12.1□□□□□ -0.47
SHMT2-233ENST00000557529 PRSS38A1L453 326 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 POM121BA6NF01 834 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 PRR19A6NJB7 356 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 FAM170BA6NMN3 283 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 PRAMEF26H0Y7S4 382 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 CIB2O75838 187 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 RSL1D1O76021 490 aaKnown RBP12.1□□□□□ -0.47
SHMT2-233ENST00000557529 FUCA1P04066 466 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 CD6P30203 668 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 THOP1P52888 689 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 CLDN2P57739 230 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 TFF2Q03403 129 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 ZP2Q05996 745 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 LRP8Q14114 963 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 DOC2AQ14183 400 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 E2F2Q14209 437 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 MMEL1Q495T6 779 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 SGO1Q5FBB7 561 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 C10orf62Q5T681 223 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-233ENST00000557529 C6orf163Q5TEZ5 329 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 FBXW10Q5XX13 1052 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 PAOXQ6QHF9 649 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 GCNT7Q6ZNI0 430 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 LPCAT2Q7L5N7 544 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 LRRC56Q8IYG6 542 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-233ENST00000557529 DEFB107AQ8IZN7 70 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 OR5AR1Q8NGP9 310 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 OR4K3Q96R72 315 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 HAUS8Q9BT25 410 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 THTPAQ9BU02 230 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 CARS2Q9HA77 564 aaKnown RBP12.1□□□□□ -0.47
SHMT2-233ENST00000557529 LRTM1Q9HBL6 345 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 FGF22Q9HCT0 170 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 C1orf109Q9NX04 203 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 ASIC5Q9NY37 505 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 CIDEBQ9UHD4 219 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 PRPF19Q9UMS4 504 aaKnown RBP12.1□□□□□ -0.47
SHMT2-233ENST00000557529 CYP8B1Q9UNU6 501 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 KCNK6Q9Y257 313 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 EIF3LQ9Y262 564 aaKnown RBP12.1□□□□□ -0.47
SHMT2-233ENST00000557529 NUMA1Q14980 2115 aa12.1□□□□□ -0.47
SHMT2-233ENST00000557529 DYTNA2CJ06 578 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 KRBA1A5PL33 1030 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 E7ENX8 843 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 E7EQ34 232 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 NPIPB8E9PQR5 432 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 H0YIV9 168 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 KDM1AO60341 852 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 NRP2O60462 931 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 SLC22A3O75751 556 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 PDYNP01213 254 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 ERGP11308 486 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 HSD3B1P14060 373 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 SLC2A4P14672 509 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 PRPH2P23942 346 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 HSD3B2P26439 372 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 RABIFP47224 123 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 DIO3P55073 304 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 CTBSQ01459 385 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 TAP2Q03519 686 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 TBL3Q12788 808 aaKnown RBP12.09□□□□□ -0.47
SHMT2-233ENST00000557529 CSTF3Q12996 717 aaKnown RBP12.09□□□□□ -0.47
SHMT2-233ENST00000557529 FZD5Q13467 585 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 UAP1L1Q3KQV9 507 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 COQ5Q5HYK3 327 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 PAGE2BQ5JRK9 111 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 TMEM31Q5JXX7 168 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 CACHD1Q5VU97 1274 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 ENPP7Q6UWV6 458 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 HACD2Q6Y1H2 254 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 ZFAND4Q86XD8 727 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 ULK2Q8IYT8 1036 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 RGL4Q8IZJ4 473 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms