RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 A0A1B0GX78 115 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 TARM1B6A8C7 271 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 AP3B1O00203 1094 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 PRICKLE3O43900 615 aaPredicted RBP15.25■□□□□ 0.03
TUBB3-213ENST00000557262 NDUFS3O75489 264 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 IPO13O94829 963 aaKnown RBP15.25■□□□□ 0.03
TUBB3-213ENST00000557262 ALBP02768 609 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 GRIA3P42263 894 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 SIX1Q15475 284 aaPredicted RBP15.25■□□□□ 0.03
TUBB3-213ENST00000557262 CYP2A13Q16696 494 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 EIF2S3LQ2VIR3 472 aaKnown RBP15.25■□□□□ 0.03
TUBB3-213ENST00000557262 TCTE1Q5JU00 501 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 YOD1Q5VVQ6 348 aaPredicted RBP15.25■□□□□ 0.03
TUBB3-213ENST00000557262 FCRL6Q6DN72 434 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 DRICH1Q6PGQ1 229 aaPredicted RBP15.25■□□□□ 0.03
TUBB3-213ENST00000557262 PPP1R32Q7Z5V6 425 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 TAX1BP1Q86VP1 789 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 LRRC6Q86X45 466 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 MPP5Q8N3R9 675 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 SSC4DQ8WTU2 575 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 FKBP10Q96AY3 582 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 RAB11FIP5Q9BXF6 653 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 IL22Q9GZX6 179 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 TREX1Q9NSU2 369 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 CUEDC1Q9NWM3 386 aaPredicted RBP15.25■□□□□ 0.03
TUBB3-213ENST00000557262 BFARQ9NZS9 450 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 GNPTGQ9UJJ9 305 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 B3GNT3Q9Y2A9 372 aa15.25■□□□□ 0.03
TUBB3-213ENST00000557262 SPTAN1Q13813 2472 aaKnown RBP15.25■□□□□ 0.03
TUBB3-213ENST00000557262 SPTBN1Q01082 2364 aaKnown RBP15.25■□□□□ 0.03
TUBB3-213ENST00000557262 UTP20O75691 2785 aaKnown RBP15.24■□□□□ 0.03
TUBB3-213ENST00000557262 SHANK1Q9Y566 2161 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 AGPSO00116 658 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 DSCR3O14972 297 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 SRPX2O60687 465 aaPredicted RBP15.24■□□□□ 0.03
TUBB3-213ENST00000557262 SEMA7AO75326 666 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 C1orf105O95561 183 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 RPS3P23396 243 aaKnown RBP eCLIP15.24■□□□□ 0.035e-8■■□□□ 13.9
TUBB3-213ENST00000557262 MMP11P24347 488 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 NMBRP28336 390 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 FOXL2P58012 376 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 CRADDP78560 199 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 ESPL1Q14674 2120 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 GRM7Q14831 915 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 FAM214AQ32MH5 1076 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 C4orf17Q53FE4 359 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 OTOAQ7RTW8 1153 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 TMEM151BQ8IW70 566 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 IQCKQ8N0W5 287 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 ZADH2Q8N4Q0 377 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 RAB42Q8N4Z0 105 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 TM9SF4Q92544 642 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 SNRNP40Q96DI7 357 aaKnown RBP15.24■□□□□ 0.03
TUBB3-213ENST00000557262 ENAMQ9NRM1 1142 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 CUTCQ9NTM9 273 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 IL1RAPL1Q9NZN1 696 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 TTC7AQ9ULT0 858 aaPredicted RBP15.24■□□□□ 0.03
TUBB3-213ENST00000557262 FER1L5A0AVI2 2057 aa15.24■□□□□ 0.03
TUBB3-213ENST00000557262 ICE1Q9Y2F5 2266 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 GOLGA6L6A8MZA4 724 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 MASP2O00187 686 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 ITGAXP20702 1163 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 BASP1P80723 227 aaKnown RBP15.23■□□□□ 0.03
TUBB3-213ENST00000557262 AIMP2Q13155 320 aaKnown RBP15.23■□□□□ 0.03
TUBB3-213ENST00000557262 MRPL49Q13405 166 aaKnown RBP15.23■□□□□ 0.03
TUBB3-213ENST00000557262 NKG7Q16617 165 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 GSTA5Q7RTV2 222 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 SDCCAG8Q86SQ7 713 aaPredicted RBP15.23■□□□□ 0.03
TUBB3-213ENST00000557262 CISD2Q8N5K1 135 aaKnown RBP15.23■□□□□ 0.03
TUBB3-213ENST00000557262 TTC29Q8NA56 475 aaPredicted RBP15.23■□□□□ 0.03
TUBB3-213ENST00000557262 HMGCLL1Q8TB92 370 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 MAGEC3Q8TD91 643 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 SKA2Q8WVK7 121 aaPredicted RBP15.23■□□□□ 0.03
TUBB3-213ENST00000557262 MAIP1Q8WWC4 291 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 C19orf60Q96EN9 201 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 FOPNLQ96NB1 174 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 ZNF285Q96NJ3 590 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 SELENOSQ9BQE4 189 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 KIFC1Q9BW19 673 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 SLC26A1Q9H2B4 701 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 WDR54Q9H977 334 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 PLEKHB1Q9UF11 243 aaPredicted RBP15.23■□□□□ 0.03
TUBB3-213ENST00000557262 ZKSCAN5Q9Y2L8 839 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 NFS1Q9Y697 457 aa15.23■□□□□ 0.03
TUBB3-213ENST00000557262 SNRNP200O75643 2136 aaKnown RBP15.22■□□□□ 0.03
TUBB3-213ENST00000557262 ANKRD12Q6UB98 2062 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 VAPBO95292 243 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 MCM3P25205 808 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 CCNFP41002 786 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 EIF3BP55884 814 aaKnown RBP15.22■□□□□ 0.03
TUBB3-213ENST00000557262 CDK16Q00536 496 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 WASHC2DQ5SRD0 308 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 PRR7Q8TB68 274 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 BIRC8Q96P09 236 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 ILKAPQ9H0C8 392 aaPredicted RBP15.22■□□□□ 0.03
TUBB3-213ENST00000557262 MRM3Q9HC36 420 aaKnown RBP15.22■□□□□ 0.03
TUBB3-213ENST00000557262 ASF1BQ9NVP2 202 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 CDC23Q9UJX2 597 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 KLK4Q9Y5K2 254 aa15.22■□□□□ 0.03
TUBB3-213ENST00000557262 FITM1A5D6W6 292 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms