RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	BIVM	Q86UB2	503 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	FAM72B	Q86X60	149 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	DSEL	Q8IZU8	1212 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	UMODL1-AS1	Q8N2C9	162 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	LILRB2	Q8N423	598 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	AOPEP	Q8N6M6	819 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	SIDT2	Q8NBJ9	832 aa	Known RBP	4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	EXD1	Q8NHP7	514 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	CPT1B	Q92523	772 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	NINJ1	Q92982	152 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	GFM2	Q969S9	779 aa	Known RBP	4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	NACC2	Q96BF6	587 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	ARSG	Q96EG1	525 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	COX14	Q96I36	57 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF514	Q96K75	400 aa	Predicted RBP	4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF396	Q96N95	335 aa	Predicted RBP	4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	SLC6A15	Q9H2J7	730 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	RMI1	Q9H9A7	625 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	SLC40A1	Q9NP59	571 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	OLAH	Q9NV23	265 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	VPS18	Q9P253	973 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	B4GALT6	Q9UBX8	382 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	PFDN2	Q9UHV9	154 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	PCDHA7	Q9UN72	937 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	PPIL1	Q9Y3C6	166 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	PCDHGB6	Q9Y5F9	930 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	CHD5	Q8TDI0	1954 aa		4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	NYNRIN	Q9P2P1	1898 aa	Known RBP	4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	FLNA	P21333	2647 aa	Known RBP	4.58	□□□□□ -1.68
SCFD1-223	ENST00000557076	LRP4	O75096	1905 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	TRGV8	A0A0C4DH27	118 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	CREB3	O43889	395 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	SNX2	O60749	519 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	SCRG1	O75711	98 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	CLDN14	O95500	239 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	VIP	P01282	170 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	KRT5	P13647	590 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	KRT4	P19013	534 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	CAPZB	P47756	277 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	TDGF1P3	P51864	188 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076		Q0VFX4	171 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	FOXD4	Q12950	439 aa	Predicted RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	AIMP2	Q13155	320 aa	Known RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	CUL4A	Q13619	759 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	KCNAB1	Q14722	419 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	CNGA3	Q16281	694 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	LONRF1	Q17RB8	773 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	AGAP7P	Q5VUJ5	663 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	PLEKHA7	Q6IQ23	1121 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	DPY19L2P1	Q6NXN4	242 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	DOK6	Q6PKX4	331 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	WASH2P	Q6VEQ5	465 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	KRBA2	Q6ZNG9	492 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	FAM92B	Q6ZTR7	304 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	MARK2	Q7KZI7	788 aa	Known RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	ENOSF1	Q7L5Y1	443 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	CHST15	Q7LFX5	561 aa	Predicted RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	MRGPRE	Q86SM8	312 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	FAM131B	Q86XD5	332 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF354C	Q86Y25	554 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	TMEM126B	Q8IUX1	230 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	ARHGEF19	Q8IW93	802 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	RAVER1	Q8IY67	606 aa	Known RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	GSPT2	Q8IYD1	628 aa	Known RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	RTL3	Q8N8U3	475 aa	Known RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	DLG3	Q92796	817 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF501	Q96CX3	271 aa	Predicted RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	C18orf8	Q96DM3	657 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	TBC1D31	Q96DN5	1066 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	SCRN2	Q96FV2	425 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	EXOC2	Q96KP1	924 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	FAM81B	Q96LP2	452 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	AGAP4	Q96P64	663 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	MLPH	Q9BV36	600 aa	Predicted RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	GTPBP4	Q9BZE4	634 aa	Known RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	SYNC	Q9H7C4	482 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	ACP6	Q9NPH0	428 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	P4HTM	Q9NXG6	502 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	UBA2	Q9UBT2	640 aa	Predicted RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	NEU3	Q9UQ49	428 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	MTMR6	Q9Y217	621 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	KCNK6	Q9Y257	313 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	PADI2	Q9Y2J8	665 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	CSAG2	Q9Y5P2	127 aa		4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.57	□□□□□ -1.68
SCFD1-223	ENST00000557076	HIVEP2	P31629	2446 aa		4.56	□□□□□ -1.68
SCFD1-223	ENST00000557076	GOLGA6C	A6NDK9	693 aa		4.56	□□□□□ -1.68
SCFD1-223	ENST00000557076	GOLGA6B	A6NDN3	693 aa		4.56	□□□□□ -1.68
SCFD1-223	ENST00000557076	SLC9B1P1	A6NJY1	282 aa		4.56	□□□□□ -1.68
SCFD1-223	ENST00000557076	FOXO6	A8MYZ6	492 aa		4.56	□□□□□ -1.68
SCFD1-223	ENST00000557076		J3KR12	359 aa		4.56	□□□□□ -1.68
SCFD1-223	ENST00000557076	VEGFD	O43915	354 aa		4.56	□□□□□ -1.68
SCFD1-223	ENST00000557076	PRAMEF11	O60813	436 aa		4.56	□□□□□ -1.68
SCFD1-223	ENST00000557076	PALM	O75781	387 aa		4.56	□□□□□ -1.68
SCFD1-223	ENST00000557076	ASMTL	O95671	621 aa		4.56	□□□□□ -1.68

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