RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SYCE1LA8MT33 242 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 H3BMM5 538 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 H7C0S8 307 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 K7ERQ8 282 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 FCHO1O14526 889 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 HDAC3O15379 428 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 HTRA2O43464 458 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 SMAD6O43541 496 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 BUD23O43709 281 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 ITM2AO43736 263 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 SMIM24O75264 130 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 MOSPD3O75425 235 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 VPS26AO75436 327 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 RFPL2O75678 378 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 GJB3O75712 270 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 RASSF9O75901 435 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 SRP72O76094 671 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 RHOBTB1O94844 696 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 LY86O95711 162 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 SERPINA6P08185 405 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 PIRTP0C851 137 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 T-ENOLP0DO92 83 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 KITP10721 976 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 EZRP15311 586 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 NQO1P15559 274 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 ALOX15P16050 662 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 EPCAMP16422 314 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 GJA1P17302 382 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 POLR2EP19388 210 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 FDXRP22570 491 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 CALB2P22676 271 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 PTPN4P29074 926 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 SERPINB3P29508 390 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 FMO4P31512 558 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 CD70P32970 193 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 HNF1BP35680 557 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 IGFALSP35858 605 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 CCR2P41597 374 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 RECQLP46063 649 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 SUOXP51687 545 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 CDKN2DP55273 166 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 IL2P60568 153 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 GALNT1Q10472 559 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 TRAF2Q12933 501 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 MRPL49Q13405 166 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 RIPK1Q13546 671 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 CAMK1Q14012 370 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 RCN2Q14257 317 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 ZRSR2Q15696 482 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 BEAN1Q3B7T3 259 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 ACCSLQ4AC99 568 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 PDCD4Q53EL6 469 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 ZNF789Q5FWF6 425 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 ARL13AQ5H913 290 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 DGKKQ5KSL6 1271 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 ATXN7L2Q5T6C5 722 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 ANKS6Q68DC2 871 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 LRRC8EQ6NSJ5 796 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 ZNF549Q6P9A3 640 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 EPGNQ6UW88 154 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 ZCCHC23Q6ZST2 131 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 ASRGL1Q7L266 308 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 GRASPQ7Z6J2 395 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 KIAA0907Q7Z7F0 614 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 CAMK1DQ8IU85 385 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 PHYKPLQ8IUZ5 450 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 CENPLQ8N0S6 344 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 TTC30BQ8N4P2 665 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 PCDH20Q8N6Y1 951 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 CCNYL1Q8N7R7 359 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.39□□□□□ -1.71
SRP54-212ENST00000556992 BOLLQ8N9W6 283 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 GLB1L3Q8NCI6 653 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 OR13C4Q8NGS5 318 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 RHEBL1Q8TAI7 183 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 STAG3L4Q8TBR4 150 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 PIH1D2Q8WWB5 315 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 LPGAT1Q92604 370 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 ERP27Q96DN0 273 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 TCEAL4Q96EI5 215 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 SCRN2Q96FV2 425 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 PDLIM5Q96HC4 596 aaKnown RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 LRIG1Q96JA1 1093 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 LMLNQ96KR4 655 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 ASB2Q96Q27 587 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 LYSMD1Q96S90 227 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 NDNQ99608 321 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 CDCA3Q99618 268 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 OLFM1Q99784 485 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 BTBD10Q9BSF8 475 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 GATA5Q9BWX5 397 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 BBS2Q9BXC9 721 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 LMAN2LQ9H0V9 348 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 CDH19Q9H159 772 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 LRMDAQ9H2I8 198 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 LINC00597Q9H2U6 94 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 MMADHCQ9H3L0 296 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 SLC40A1Q9NP59 571 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 PFDN4Q9NQP4 134 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms