RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 C2orf73Q8N5S3 287 aaPredicted RBP8.64□□□□□ -1.03
HNRNPC-227ENST00000556897 LINC01555Q8NAE3 123 aa8.64□□□□□ -1.03
HNRNPC-227ENST00000556897 PSMF1Q92530 271 aa8.64□□□□□ -1.03
HNRNPC-227ENST00000556897 C8orf44Q96CB5 159 aa8.64□□□□□ -1.03
HNRNPC-227ENST00000556897 VPS50Q96JG6 964 aa8.64□□□□□ -1.03
HNRNPC-227ENST00000556897 C19orf43Q9BQ61 176 aa8.64□□□□□ -1.03
HNRNPC-227ENST00000556897 HEMGNQ9BXL5 484 aa8.64□□□□□ -1.03
HNRNPC-227ENST00000556897 IFNKQ9P0W0 207 aa8.64□□□□□ -1.03
HNRNPC-227ENST00000556897 PTGFRNQ9P2B2 879 aa8.64□□□□□ -1.03
HNRNPC-227ENST00000556897 CIDEBQ9UHD4 219 aa8.64□□□□□ -1.03
HNRNPC-227ENST00000556897 NAV3Q8IVL0 2385 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 SLC5A10A0PJK1 596 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 H7C0S8 307 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 MAP2K7O14733 419 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 USP1O94782 785 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 ZRANB2O95218 330 aaKnown RBP eCLIP8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 FTH1P02794 183 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 TPH1P17752 444 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 CD9P21926 228 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 MST1P26927 711 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 PKLRP30613 574 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 NSG1P42857 185 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 CA7P43166 264 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 MARCKSL1P49006 195 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 RAB28P51157 221 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 CSE1LP55060 971 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 TPM4P67936 248 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 KLC1Q07866 573 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 INAQ16352 499 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 SYTL3Q4VX76 610 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 ZC3H12BQ5HYM0 836 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 ANKRD20A2Q5SQ80 823 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 ANKRD20A1Q5TYW2 823 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 ANKRD20A3Q5VUR7 823 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 YOD1Q5VVQ6 348 aaPredicted RBP8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 MTFR2Q6P444 385 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 RPTNQ6XPR3 784 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 ARHGEF18Q6ZSZ5 1173 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 BBS12Q6ZW61 710 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 NLRP9Q7RTR0 991 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 TMTC1Q8IUR5 882 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 KBTBD2Q8IY47 623 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 KATNAL2Q8IYT4 538 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 RCOR2Q8IZ40 523 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 ZNF295-AS1Q8N0V1 137 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 SIRT6Q8N6T7 355 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 OR8K1Q8NGG5 319 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 CCDC110Q8TBZ0 833 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 STT3BQ8TCJ2 826 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 BRIX1Q8TDN6 353 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 IL17FQ96PD4 163 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 DNAJC7Q99615 494 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 CHP1Q99653 195 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 TBL1YQ9BQ87 522 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 SELENOSQ9BQE4 189 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 MENTQ9BUN1 341 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 ARNT2Q9HBZ2 717 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 NLE1Q9NVX2 485 aaPredicted RBP8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 C3orf18Q9UK00 162 aa8.63□□□□□ -1.03
HNRNPC-227ENST00000556897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.63□□□□□ -1.038e-13■■■□□ 16.8
HNRNPC-227ENST00000556897 CACNA1CQ13936 2221 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 SPG11Q96JI7 2443 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 NSG1A0A0A6YYJ2 146 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 MACROD2A1Z1Q3 448 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 HYKKA2RU49 373 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 FITM1A5D6W6 292 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 APOC4-APOC2K7ER74 178 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 KCNN4O15554 427 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 KDM1AO60341 852 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 CTSVO60911 334 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 MED26O95402 600 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 APOC2P02655 101 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 ZGLP1P0C6A0 271 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 PRR35P0CG20 571 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 COX6A1P12074 109 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 SOX11P35716 441 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 CARSP49589 748 aaKnown RBP8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 VSX2P58304 361 aaPredicted RBP8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 KRTAP10-9P60411 292 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 OCA2Q04671 838 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 POU6F1Q14863 301 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 SF1Q15637 639 aaKnown RBP8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 FAM214AQ32MH5 1076 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 DNAJC21Q5F1R6 531 aaKnown RBP8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 TCTE1Q5JU00 501 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 WASHC2DQ5SRD0 308 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 CCDC181Q5TID7 509 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 ATG9BQ674R7 924 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 CAVIN1Q6NZI2 390 aaKnown RBP8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 FIGLAQ6QHK4 219 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 NDUFAF7Q7L592 441 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 TTC29Q8NA56 475 aaPredicted RBP8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 ACTL9Q8TC94 416 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 HAS2Q92819 552 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 SLC22A18Q96BI1 424 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 MIEF2Q96C03 454 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 CDKN2AIPNLQ96HQ2 116 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 CCDC42Q96M95 316 aa8.62□□□□□ -1.03
HNRNPC-227ENST00000556897 SPATA13Q96N96 652 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms