RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GPR61Q9BZJ8 451 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 POLR1EQ9GZS1 481 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 HIPK3Q9H422 1215 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 TNFRSF12AQ9NP84 129 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 STOML1Q9UBI4 398 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 RPS6KA6Q9UK32 745 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 OGDHLQ9ULD0 1010 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 RUVBL2Q9Y230 463 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 LRRC42Q9Y546 428 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 SMIM31A0A1B0GVY4 71 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ABHD14A-ACY1A0A1B0GW23 586 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 C2orf78A6NCI8 922 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 TTLL8A6PVC2 850 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 F5H5T6 163 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 LINC01387J3KSC0 135 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 B4GAT1O43505 415 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PI15O43692 258 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 MAGEC1O60732 1142 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 KRT36O76013 467 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 S1PR4O95977 384 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 RNF224P0DH78 156 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ATP5C1P36542 298 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 FNTBP49356 437 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 DHPSP49366 369 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 CASP6P55212 293 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 SKP1P63208 163 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 POU4F1Q01851 419 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 GNA12Q03113 381 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 KCNC4Q03721 635 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 GLO1Q04760 184 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 TBCCQ15814 346 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 USP41Q3LFD5 358 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 TECRLQ5HYJ1 363 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 Q5PR19 223 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 KANK2Q63ZY3 851 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PTRHD1Q6GMV3 140 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 CXorf57Q6NSI4 855 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 JMJD6Q6NYC1 403 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF549Q6P9A3 640 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 KLHDC10Q6PID8 442 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 CYP20A1Q6UW02 462 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PTAR1Q7Z6K3 402 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 DENND1CQ8IV53 801 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF454Q8N9F8 522 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 TDRD5Q8NAT2 981 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 SLC37A3Q8NCC5 494 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 CATSPER1Q8NEC5 780 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 NCSTNQ92542 709 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 HDAC10Q969S8 669 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 MAGED4Q96JG8 741 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ELMO2Q96JJ3 720 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 SMIM14Q96QK8 99 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PINK1Q9BXM7 581 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 TRIM54Q9BYV2 358 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 BCL2L14Q9BZR8 327 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 C6orf62Q9GZU0 229 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 MFSD1Q9H3U5 465 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF385DQ9H6B1 395 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 TM9SF3Q9HD45 589 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 GKN1Q9NS71 199 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 DNMT3LQ9UJW3 386 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 HCN2Q9UL51 889 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 CNOT6Q9ULM6 557 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 BACE2Q9Y5Z0 518 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 DNAH14Q0VDD8 3507 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 A0A088AWK7 358 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 TMEM233B4DJY2 109 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 L7N2F9 121 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 BUD23O43709 281 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 TM7SF2O76062 418 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 SORBS2O94875 1100 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PRAMEF12O95522 483 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 FGF4P08620 206 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PIRTP0C851 137 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PRSS56P0CW18 603 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 BMP1P13497 986 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 KCNC1P48547 511 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 THOC5Q13769 683 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 COL9A2Q14055 689 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF805Q5CZA5 627 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 C3orf33Q6P1S2 294 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ZCCHC12Q6PEW1 402 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 DBX2Q6ZNG2 339 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 FRMD7Q6ZUT3 714 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PIM3Q86V86 326 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 GPR65Q8IYL9 337 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ULK2Q8IYT8 1036 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 KDM1BQ8NB78 822 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF680Q8NEM1 530 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 OR13C4Q8NGS5 318 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF461Q8TAF7 563 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ST8SIA2Q92186 375 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 FEM1CQ96JP0 617 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PANX3Q96QZ0 392 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 SLC22A12Q96S37 553 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 LBHD1Q9BQE6 289 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 MKRN2Q9H000 416 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 WDR55Q9H6Y2 383 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 GPR52Q9Y2T5 361 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 RAP2CQ9Y3L5 183 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms