RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 LRRC6Q86X45 466 aa18.94■□□□□ 0.62
PRKCH-219ENST00000555906 MCATQ8IVS2 390 aaKnown RBP18.94■□□□□ 0.62
PRKCH-219ENST00000555906 IQCKQ8N0W5 287 aa18.94■□□□□ 0.62
PRKCH-219ENST00000555906 SPC24Q8NBT2 197 aa18.94■□□□□ 0.62
PRKCH-219ENST00000555906 SSC4DQ8WTU2 575 aa18.94■□□□□ 0.62
PRKCH-219ENST00000555906 IL22Q9GZX6 179 aa18.94■□□□□ 0.62
PRKCH-219ENST00000555906 SLC22A11Q9NSA0 550 aa18.94■□□□□ 0.62
PRKCH-219ENST00000555906 CUEDC1Q9NWM3 386 aaPredicted RBP18.94■□□□□ 0.62
PRKCH-219ENST00000555906 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.94■□□□□ 0.62
PRKCH-219ENST00000555906 CIDEBQ9UHD4 219 aa18.94■□□□□ 0.62
PRKCH-219ENST00000555906 SLC39A10Q9ULF5 831 aa18.94■□□□□ 0.62
PRKCH-219ENST00000555906 ZKSCAN5Q9Y2L8 839 aa18.94■□□□□ 0.62
PRKCH-219ENST00000555906 MRFAP1Q9Y605 127 aa18.94■□□□□ 0.62
PRKCH-219ENST00000555906 TCP11X1B4DZS4 312 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 AGPSO00116 658 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 AP3B1O00203 1094 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 KPNA5O15131 536 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 ALBP02768 609 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 ZSCAN5DPP0CG00 497 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 ATXN8OSP0DMR3 200 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 RPL22P35268 128 aaKnown RBP18.93■□□□□ 0.62
PRKCH-219ENST00000555906 SESN2P58004 480 aaPredicted RBP18.93■□□□□ 0.62
PRKCH-219ENST00000555906 FOXL2P58012 376 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 RPS6KA1Q15418 735 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 CCNG2Q16589 344 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 TCTE1Q5JU00 501 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 FCRL6Q6DN72 434 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 TTC23LQ6PF05 361 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 TTLL10Q6ZVT0 673 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 GSDMBQ8TAX9 411 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 TM9SF4Q92544 642 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 ZNF285Q96NJ3 590 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 SLC26A1Q9H2B4 701 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 ZNF552Q9H707 407 aaPredicted RBP18.93■□□□□ 0.62
PRKCH-219ENST00000555906 B3GNT3Q9Y2A9 372 aa18.93■□□□□ 0.62
PRKCH-219ENST00000555906 TEX15Q9BXT5 2789 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 GOLGA6L6A8MZA4 724 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 DSCR3O14972 297 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 PRICKLE3O43900 615 aaPredicted RBP18.92■□□□□ 0.62
PRKCH-219ENST00000555906 PIM1P11309 404 aaPredicted RBP18.92■□□□□ 0.62
PRKCH-219ENST00000555906 ALAS2P22557 587 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 CRADDP78560 199 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 BASP1P80723 227 aaKnown RBP18.92■□□□□ 0.62
PRKCH-219ENST00000555906 GRM7Q14831 915 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 SF1Q15637 639 aaKnown RBP18.92■□□□□ 0.62
PRKCH-219ENST00000555906 FIGLAQ6QHK4 219 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 RAB42Q8N4Z0 105 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 C2orf73Q8N5S3 287 aaPredicted RBP18.92■□□□□ 0.62
PRKCH-219ENST00000555906 LMNTD1Q8N9Z9 388 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 HMGCLL1Q8TB92 370 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 RAD51AP1Q96B01 352 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 MRM3Q9HC36 420 aaKnown RBP18.92■□□□□ 0.62
PRKCH-219ENST00000555906 CUTCQ9NTM9 273 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 MAP10Q9P2G4 905 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 KLK4Q9Y5K2 254 aa18.92■□□□□ 0.62
PRKCH-219ENST00000555906 FITM1A5D6W6 292 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 TARM1B6A8C7 271 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 C1orf105O95561 183 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 MMP11P24347 488 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 CCNFP41002 786 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 BDKRB1P46663 353 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 AIMP2Q13155 320 aaKnown RBP18.91■□□□□ 0.62
PRKCH-219ENST00000555906 MRPL49Q13405 166 aaKnown RBP18.91■□□□□ 0.62
PRKCH-219ENST00000555906 COX15Q7KZN9 410 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 OTOAQ7RTW8 1153 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 OVCH1Q7RTY7 1134 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 TTC29Q8NA56 475 aaPredicted RBP18.91■□□□□ 0.62
PRKCH-219ENST00000555906 ZUFSPQ96AP4 578 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 SPSB2Q99619 263 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 SELENOSQ9BQE4 189 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 ATP13A2Q9NQ11 1180 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 BFARQ9NZS9 450 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 SPATA7Q9P0W8 599 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 NXT1Q9UKK6 140 aaKnown RBP18.91■□□□□ 0.62
PRKCH-219ENST00000555906 DRG1Q9Y295 367 aaKnown RBP18.91■□□□□ 0.62
PRKCH-219ENST00000555906 NFS1Q9Y697 457 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 FAM169AQ9Y6X4 670 aa18.91■□□□□ 0.62
PRKCH-219ENST00000555906 SEMA7AO75326 666 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 NDUFS3O75489 264 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 ARNTP27540 789 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 NMBRP28336 390 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 ATP5DP30049 168 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 NPY2RP49146 381 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 EIF3BP55884 814 aaKnown RBP18.9■□□□□ 0.62
PRKCH-219ENST00000555906 NKG7Q16617 165 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 TYSND1Q2T9J0 566 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 PLEKHN1Q494U1 663 aaPredicted RBP18.9■□□□□ 0.62
PRKCH-219ENST00000555906 CTSL3PQ5NE16 218 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 RNF187Q5TA31 235 aaPredicted RBP18.9■□□□□ 0.62
PRKCH-219ENST00000555906 TMEM151BQ8IW70 566 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 SKA2Q8WVK7 121 aaPredicted RBP18.9■□□□□ 0.62
PRKCH-219ENST00000555906 MAIP1Q8WWC4 291 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 SNRNP40Q96DI7 357 aaKnown RBP18.9■□□□□ 0.62
PRKCH-219ENST00000555906 ILKAPQ9H0C8 392 aaPredicted RBP18.9■□□□□ 0.62
PRKCH-219ENST00000555906 SLC6A20Q9NP91 592 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 PLEKHB1Q9UF11 243 aaPredicted RBP18.9■□□□□ 0.62
PRKCH-219ENST00000555906 CDC23Q9UJX2 597 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 FBXL4Q9UKA2 621 aa18.9■□□□□ 0.62
PRKCH-219ENST00000555906 TTC7AQ9ULT0 858 aaPredicted RBP18.9■□□□□ 0.62
PRKCH-219ENST00000555906 HEATR5BQ9P2D3 2071 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms