RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 KIR2DS3Q14952 304 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 RPS6KA1Q15418 735 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 CCNG2Q16589 344 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 SLC5A12Q1EHB4 618 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 FASTKD1Q53R41 847 aaKnown RBP10.4□□□□□ -0.74
TDP1-212ENST00000555565 DNAJC21Q5F1R6 531 aaKnown RBP10.4□□□□□ -0.74
TDP1-212ENST00000555565 PCID2Q5JVF3 399 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 SLC22A15Q8IZD6 547 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 DNAJC22Q8N4W6 341 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 LMNTD1Q8N9Z9 388 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 LINC01555Q8NAE3 123 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 N4BP2L2Q92802 583 aaPredicted RBP10.4□□□□□ -0.74
TDP1-212ENST00000555565 MENTQ9BUN1 341 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 CARD6Q9BX69 1037 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 G3BP2Q9UN86 482 aaKnown RBP10.4□□□□□ -0.74
TDP1-212ENST00000555565 CSAG2Q9Y5P2 127 aa10.4□□□□□ -0.74
TDP1-212ENST00000555565 MDC1Q14676 2089 aaKnown RBP10.39□□□□□ -0.75
TDP1-212ENST00000555565 ISM1B1AKI9 464 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 C9J4A7 227 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 F8W8V4 182 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 MASP2O00187 686 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 PRMT5O14744 637 aaPredicted RBP10.39□□□□□ -0.75
TDP1-212ENST00000555565 APOA4P06727 396 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 STSP08842 583 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 AGXTP21549 392 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 AOAHP28039 575 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 PKLRP30613 574 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 PPARGP37231 505 aaPredicted RBP10.39□□□□□ -0.75
TDP1-212ENST00000555565 RAB28P51157 221 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 RRADP55042 308 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 PER3P56645 1201 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 SOX8P57073 446 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 SESN2P58004 480 aaPredicted RBP10.39□□□□□ -0.75
TDP1-212ENST00000555565 ART3Q13508 389 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 KYNUQ16719 465 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 C1orf189Q5VU69 101 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 RHBDD2Q6NTF9 364 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 DRICH1Q6PGQ1 229 aaPredicted RBP10.39□□□□□ -0.75
TDP1-212ENST00000555565 SPNS3Q6ZMD2 512 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 FAM20CQ8IXL6 584 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 KRT222Q8N1A0 295 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 PPHLN1Q8NEY8 458 aaKnown RBP10.39□□□□□ -0.75
TDP1-212ENST00000555565 ASZ1Q8WWH4 475 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 IL17FQ96PD4 163 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 GBP5Q96PP8 586 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 DHRS4Q9BTZ2 278 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 ILKAPQ9H0C8 392 aaPredicted RBP10.39□□□□□ -0.75
TDP1-212ENST00000555565 P2RY12Q9H244 342 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 EIF2B3Q9NR50 452 aaKnown RBP10.39□□□□□ -0.75
TDP1-212ENST00000555565 TREX1Q9NSU2 369 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 CATSPERZQ9NTU4 200 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 COPG2Q9UBF2 871 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 DHCR7Q9UBM7 475 aaKnown RBP10.39□□□□□ -0.75
TDP1-212ENST00000555565 CIDEBQ9UHD4 219 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 ANAPC5Q9UJX4 755 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 DRG1Q9Y295 367 aaKnown RBP10.39□□□□□ -0.75
TDP1-212ENST00000555565 KLHL20Q9Y2M5 609 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 AP1M2Q9Y6Q5 423 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 DOCK10Q96BY6 2186 aa10.39□□□□□ -0.75
TDP1-212ENST00000555565 GOLGA6L6A8MZA4 724 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 CD3EAPO15446 510 aaKnown RBP10.38□□□□□ -0.75
TDP1-212ENST00000555565 ZSCAN9O15535 394 aaPredicted RBP10.38□□□□□ -0.75
TDP1-212ENST00000555565 KDM1AO60341 852 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 CNOT3O75175 753 aaKnown RBP10.38□□□□□ -0.75
TDP1-212ENST00000555565 SLCO2B1O94956 709 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 EDN3P14138 238 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 MAGP20916 626 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 CD9P21926 228 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 KCNJ1P48048 391 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 TTPAP49638 278 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 KCTD19Q17RG1 926 aaPredicted RBP10.38□□□□□ -0.75
TDP1-212ENST00000555565 AARS2Q5JTZ9 985 aaKnown RBP10.38□□□□□ -0.75
TDP1-212ENST00000555565 DCAF10Q5QP82 559 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 MLIPQ5VWP3 458 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 UNC5DQ6UXZ4 953 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 ZNF662Q6ZS27 426 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 TMEM151BQ8IW70 566 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 DCUN1D3Q8IWE4 304 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 ZNF295-AS1Q8N0V1 137 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 GALNT16Q8N428 558 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 C2orf73Q8N5S3 287 aaPredicted RBP10.38□□□□□ -0.75
TDP1-212ENST00000555565 ZNF655Q8N720 491 aaPredicted RBP10.38□□□□□ -0.75
TDP1-212ENST00000555565 CFAP61Q8NHU2 1237 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 GRHL3Q8TE85 626 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 ITLN2Q8WWU7 325 aaPredicted RBP10.38□□□□□ -0.75
TDP1-212ENST00000555565 C17orf62Q9BQA9 187 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 TSSK1BQ9BXA7 367 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 TRIM8Q9BZR9 551 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 IL22Q9GZX6 179 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 RUBCNLQ9H714 662 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 LZTFL1Q9NQ48 299 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 AGPAT4Q9NRZ5 378 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 ITGB1BP2Q9UKP3 347 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 PLCL2Q9UPR0 1127 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 PADI2Q9Y2J8 665 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 PCM1Q15154 2024 aa10.38□□□□□ -0.75
TDP1-212ENST00000555565 FGGP02679 453 aa10.37□□□□□ -0.75
TDP1-212ENST00000555565 RPN2P04844 631 aa10.37□□□□□ -0.75
TDP1-212ENST00000555565 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
TDP1-212ENST00000555565 ARNTP27540 789 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms