RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CPNE9Q8IYJ1 553 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 DSELQ8IZU8 1212 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 ZNF843Q8N446 348 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 DNAJC22Q8N4W6 341 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 HMGCLL1Q8TB92 370 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 MR1Q95460 341 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 SLC22A18Q96BI1 424 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 LRRC39Q96DD0 335 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 LRFN5Q96NI6 719 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 CHST8Q9H2A9 424 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 SPATA7Q9P0W8 599 aa19.74■□□□□ 0.75
VTI1B-205ENST00000555543 TLN1Q9Y490 2541 aaKnown RBP19.74■□□□□ 0.75
VTI1B-205ENST00000555543 C21orf140B9A014 251 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 E7EQ34 232 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 MYO1CO00159 1063 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 MEN1O00255 615 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 ZNF749O43361 778 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 AHSGP02765 367 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 ERGP11308 486 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 CYP2A13Q16696 494 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 CRTC2Q53ET0 693 aaPredicted RBP19.73■□□□□ 0.75
VTI1B-205ENST00000555543 TEDDM1Q5T9Z0 273 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 FCRL6Q6DN72 434 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 BORAQ6PGQ7 559 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 CYHR1Q6ZMK1 362 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 PIWIL4Q7Z3Z4 852 aaKnown RBP19.73■□□□□ 0.75
VTI1B-205ENST00000555543 OR9A1PQ8NGU1 263 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 MAGEC3Q8TD91 643 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 N4BP2L2Q92802 583 aaPredicted RBP19.73■□□□□ 0.75
VTI1B-205ENST00000555543 INPP5DQ92835 1189 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 CLIP3Q96DZ5 547 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 MIPEPQ99797 713 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 ARHGAP9Q9BRR9 750 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 SPRTNQ9H040 489 aaPredicted RBP19.73■□□□□ 0.75
VTI1B-205ENST00000555543 DPH5Q9H2P9 285 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 ACTL8Q9H568 366 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 KCND3Q9UK17 655 aa19.73■□□□□ 0.75
VTI1B-205ENST00000555543 ZNF462Q96JM2 2506 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 FAM187AA6NFU0 413 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 E7ESA3 106 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 VPS26AO75436 327 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 OR2B3O76000 313 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 CATP04040 527 aaKnown RBP19.72■□□□□ 0.75
VTI1B-205ENST00000555543 MPC1LP0DKB6 136 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 MCM3P25205 808 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 CDKN2DP55273 166 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 YBX1P67809 324 aaKnown RBP19.72■□□□□ 0.75
VTI1B-205ENST00000555543 MC1RQ01726 317 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 PDIA2Q13087 525 aaKnown RBP19.72■□□□□ 0.75
VTI1B-205ENST00000555543 ERV3-1Q14264 604 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 SF1Q15637 639 aaKnown RBP19.72■□□□□ 0.75
VTI1B-205ENST00000555543 PTCHD3Q3KNS1 767 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 FAM198BQ6UWH4 519 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 KIAA0408Q6ZU52 694 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 SYTL1Q8IYJ3 562 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 GPR135Q8IZ08 494 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 RAB42Q8N4Z0 105 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 FBXO36Q8NEA4 188 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 OR2A1Q8NGT9 310 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 ASB11Q8WXH4 323 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 MED8Q96G25 268 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 PKP4Q99569 1192 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 ERP44Q9BS26 406 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 PPANQ9NQ55 473 aaKnown RBP19.72■□□□□ 0.75
VTI1B-205ENST00000555543 FAM114A2Q9NRY5 505 aa19.72■□□□□ 0.75
VTI1B-205ENST00000555543 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.72■□□□□ 0.75
VTI1B-205ENST00000555543 FASNP49327 2511 aaKnown RBP19.72■□□□□ 0.75
VTI1B-205ENST00000555543 FER1L5A0AVI2 2057 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 NRP2O60462 931 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 CREG1O75629 220 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 ENO3P13929 434 aaPredicted RBP19.71■□□□□ 0.75
VTI1B-205ENST00000555543 GRIA3P42263 894 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 DEFB109BQ30KR1 87 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 ZNF385CQ66K41 422 aaPredicted RBP19.71■□□□□ 0.75
VTI1B-205ENST00000555543 FIGLAQ6QHK4 219 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 GALNT7Q86SF2 657 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 OR2L3Q8NG85 312 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 C16orf45Q96MC5 204 aaPredicted RBP19.71■□□□□ 0.75
VTI1B-205ENST00000555543 CATSPER2Q96P56 530 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 EURLQ9NYK6 297 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 GRHL1Q9NZI5 618 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 TRMT6Q9UJA5 497 aaKnown RBP19.71■□□□□ 0.75
VTI1B-205ENST00000555543 PLCL2Q9UPR0 1127 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 COL6A6A6NMZ7 2263 aa19.71■□□□□ 0.75
VTI1B-205ENST00000555543 GFYI3L273 518 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 ZSCAN9O15535 394 aaPredicted RBP19.7■□□□□ 0.74
VTI1B-205ENST00000555543 KLK3P07288 261 aaPredicted RBP19.7■□□□□ 0.74
VTI1B-205ENST00000555543 CAPN1P07384 714 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 CBSLP0DN79 551 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 PTPN4P29074 926 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 CBSP35520 551 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 PGGT1BP53609 377 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 FRG1Q14331 258 aaKnown RBP19.7■□□□□ 0.74
VTI1B-205ENST00000555543 FAM69BQ5VUD6 431 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 DUPD1Q68J44 220 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 SUSD1Q6UWL2 747 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 MAATS1Q7Z4T9 603 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 ZNF655Q8N720 491 aaPredicted RBP19.7■□□□□ 0.74
VTI1B-205ENST00000555543 FBXO15Q8NCQ5 510 aaPredicted RBP19.7■□□□□ 0.74
VTI1B-205ENST00000555543 GABPB2Q8TAK5 448 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms