RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZBED8Q8IZ13 594 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 WDTC1Q8N5D0 677 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 POMGNT1Q8WZA1 660 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 LRRC59Q96AG4 307 aaKnown RBP2.25□□□□□ -2.05
SRP54-207ENST00000555535 CNRIP1Q96F85 164 aaPredicted RBP2.25□□□□□ -2.05
SRP54-207ENST00000555535 B3GALT6Q96L58 329 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 CEP295NLQ96MC4 621 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 FAM218AQ96MZ4 157 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 ZIM3Q96PE6 472 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 RAD9AQ99638 391 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 HEXA-AS1Q9H8Q6 139 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 PPANQ9NQ55 473 aaKnown RBP2.25□□□□□ -2.05
SRP54-207ENST00000555535 SERINC1Q9NRX5 453 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 FEZF1A0PJY2 475 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 ZNF840PA6NDX5 716 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 MYO1GB0I1T2 1018 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 EPHB6O15197 1021 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 TRUB2O95900 331 aaKnown RBP2.24□□□□□ -2.05
SRP54-207ENST00000555535 PPARGP37231 505 aaPredicted RBP2.24□□□□□ -2.05
SRP54-207ENST00000555535 TSFMP43897 325 aaKnown RBP2.24□□□□□ -2.05
SRP54-207ENST00000555535 LBX1P52954 281 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 CDH8P55286 799 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 CDK3Q00526 305 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 VITQ6UXI7 678 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 TMPRSS11FQ6ZWK6 438 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 IKBIPQ70UQ0 350 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 TIPARPQ7Z3E1 657 aaKnown RBP2.24□□□□□ -2.05
SRP54-207ENST00000555535 AACSQ86V21 672 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 METTL4Q8N3J2 472 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 AFAP1Q8N556 730 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 SUMF1Q8NBK3 374 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 PAPD5Q8NDF8 572 aaKnown RBP2.24□□□□□ -2.05
SRP54-207ENST00000555535 OR13C3Q8NGS6 347 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 TDRD7Q8NHU6 1098 aaKnown RBP2.24□□□□□ -2.05
SRP54-207ENST00000555535 ITPAQ9BY32 194 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 TUBB1Q9H4B7 451 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 DIAPH3Q9NSV4 1193 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.24□□□□□ -2.05
SRP54-207ENST00000555535 HACL1Q9UJ83 578 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 SLC6A5Q9Y345 797 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 STYXL1Q9Y6J8 313 aa2.24□□□□□ -2.05
SRP54-207ENST00000555535 LNP1A1A4G5 178 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 PHF1O43189 567 aaPredicted RBP2.23□□□□□ -2.05
SRP54-207ENST00000555535 SNAP91O60641 907 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 MITFO75030 526 aaPredicted RBP2.23□□□□□ -2.05
SRP54-207ENST00000555535 MED24O75448 989 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 POP4O95707 220 aaKnown RBP2.23□□□□□ -2.05
SRP54-207ENST00000555535 RB1P06400 928 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 CLTBP09497 229 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 LAMP2P13473 410 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 PDHA2P29803 388 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 CAPGP40121 348 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 TMF1P82094 1093 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 EXT1Q16394 746 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 ZNF74Q16587 644 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 TMEM95Q3KNT9 176 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 LCN1P1Q5VSP4 162 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 UGT3A1Q6NUS8 523 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 CHST9Q7L1S5 443 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 LDB1Q86U70 411 aaPredicted RBP2.23□□□□□ -2.05
SRP54-207ENST00000555535 ZFAND4Q86XD8 727 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 SMAP1Q8IYB5 467 aaPredicted RBP2.23□□□□□ -2.05
SRP54-207ENST00000555535 PCYOX1LQ8NBM8 494 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 IL17REQ8NFR9 667 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 PGAM5Q96HS1 289 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 SPAG5Q96R06 1193 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 SEC62Q99442 399 aaKnown RBP2.23□□□□□ -2.05
SRP54-207ENST00000555535 MAP3K3Q99759 626 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 NKX3-1Q99801 234 aaPredicted RBP2.23□□□□□ -2.05
SRP54-207ENST00000555535 OVOL2Q9BRP0 275 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 SLITRK2Q9H156 845 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 KCNK15Q9H427 330 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 B3GAT2Q9NPZ5 323 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 FAM207AQ9NSI2 230 aaPredicted RBP2.23□□□□□ -2.05
SRP54-207ENST00000555535 SPHK1Q9NYA1 384 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 PLAGL1Q9UM63 463 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 STUB1Q9UNE7 303 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 TMEM98Q9Y2Y6 226 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 WIPI2Q9Y4P8 454 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 ARID2Q68CP9 1835 aa2.23□□□□□ -2.05
SRP54-207ENST00000555535 ZNF541Q9H0D2 1346 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 C2orf81A6NN90 581 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 CDRT15L2A8MXV6 281 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 SNURFLB1AK76 121 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 FAM220BPB1ANY3 271 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 G3V2L1 256 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 GALR3O60755 368 aaPredicted RBP2.22□□□□□ -2.05
SRP54-207ENST00000555535 ZWINTO95229 277 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 JAK1P23458 1154 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 PTPN3P26045 913 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 OXTRP30559 389 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 MAPK4P31152 587 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 ACSL1P33121 698 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 MNDAP41218 407 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 NDPQ00604 133 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 CXCL9Q07325 125 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 LMOD3Q0VAK6 560 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 ODF4Q2M2E3 257 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 ELFN2Q5R3F8 820 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 SNX30Q5VWJ9 437 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms