RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	LACTB2	Q53H82	288 aa	Predicted RBP	4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	SIRPB2	Q5JXA9	342 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	CCDC158	Q5M9N0	1113 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	CORO6	Q6QEF8	472 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	KCTD8	Q6ZWB6	473 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	RAPH1	Q70E73	1250 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	C16orf82	Q7Z2V1	217 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	ARMC9	Q7Z3E5	817 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	TMEM139	Q8IV31	216 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	RASGEF1A	Q8N9B8	481 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	UXS1	Q8NBZ7	420 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	DBF4B	Q8NFT6	615 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	SORCS1	Q8WY21	1168 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	RIT1	Q92963	219 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	BSCL2	Q96G97	398 aa	Predicted RBP	4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	MED30	Q96HR3	178 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	CCDC43	Q96MW1	224 aa	Known RBP	4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	IL17F	Q96PD4	163 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	MYADM	Q96S97	322 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	ZPBP	Q9BS86	351 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	PRRG4	Q9BZD6	226 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	DAPK2	Q9UIK4	370 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	WDR83OS	Q9Y284	106 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	TRIM17	Q9Y577	477 aa		4.07	□□□□□ -1.76
KTN1-222	ENST00000555506	IGLV5-45	A0A087WSX0	123 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	TRAV24	A0A0B4J272	114 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	CASTOR2	A6NHX0	329 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	SMTNL1	A8MU46	457 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	TULP2	O00295	520 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	PLOD2	O00469	737 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	PPIP5K2	O43314	1243 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	SMAD6	O43541	496 aa	Known RBP	4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	PAPSS2	O95340	614 aa	Predicted RBP	4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	CCKAR	P32238	428 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	HOXA1	P49639	335 aa	Predicted RBP	4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	ST8SIA6	P61647	398 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	PITX1	P78337	314 aa	Predicted RBP	4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	UBXN1	Q04323	297 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	RCN2	Q14257	317 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	PHLDA2	Q53GA4	152 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	PDSS1	Q5T2R2	415 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	CYP4A22	Q5TCH4	519 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	C9orf57	Q5W0N0	161 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	PLBD1	Q6P4A8	553 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	CASC4	Q6P4E1	433 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	SLC9B2	Q86UD5	537 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	NAT8L	Q8N9F0	302 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	SPC24	Q8NBT2	197 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	OR11H4	Q8NGC9	324 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	OR4K1	Q8NGD4	311 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	ZNF473	Q8WTR7	871 aa	Known RBP	4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	SECTM1	Q8WVN6	248 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	IGSF21	Q96ID5	467 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	MARK4	Q96L34	752 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	DUX5	Q96PT3	197 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	RTP3	Q9BQQ7	232 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	MIS12	Q9H081	205 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	S1PR5	Q9H228	398 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	SNX25	Q9H3E2	840 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	DDX31	Q9H8H2	851 aa	Known RBP	4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	PELI2	Q9HAT8	420 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	CD93	Q9NPY3	652 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	GSN-AS1	Q9NRJ2	163 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	PTTG2	Q9NZH5	202 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	CNIH4	Q9P003	139 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	SLC7A7	Q9UM01	511 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	JRKL	Q9Y4A0	524 aa		4.06	□□□□□ -1.76
KTN1-222	ENST00000555506	IGKV2D-30	A0A075B6S6	120 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	ATP6AP2	O75787	350 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	PLG	P00747	810 aa	Predicted RBP	4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	C9	P02748	559 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	ITIH1	P19827	911 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	PSMB4	P28070	264 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	RPL21	P46778	160 aa	Known RBP	4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	ZNF132	P52740	706 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	SNU13	P55769	128 aa	Known RBP	4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	STX1B	P61266	288 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	ILF2	Q12905	390 aa	Known RBP	4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	KEAP1	Q14145	624 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	ODF4	Q2M2E3	257 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	ITPRIPL2	Q3MIP1	535 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	SPDYC	Q5MJ68	293 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	NADSYN1	Q6IA69	706 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	CYB5D1	Q6P9G0	228 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	ZNF852	Q6ZMS4	543 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	PHLDB2	Q86SQ0	1253 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	ZNF554	Q86TJ5	538 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	PLD3	Q8IV08	490 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	OR2T12	Q8NG77	320 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	MGARP	Q8TDB4	240 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	LYZL4	Q96KX0	146 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	FAM20A	Q96MK3	541 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	HNRNPAB	Q99729	332 aa	Known RBP	4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	ZNF350	Q9GZX5	532 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	EVA1A	Q9H8M9	152 aa		4.05	□□□□□ -1.76
KTN1-222	ENST00000555506	DBNDD1	Q9H9R9	158 aa		4.05	□□□□□ -1.76

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