RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 FERD3LQ96RJ6 166 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 INSM2Q96T92 566 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 SLC38A3Q99624 504 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 ZNF395Q9H8N7 513 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 NMRAL1Q9HBL8 299 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 BATF3Q9NR55 127 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 NCKIPSDQ9NZQ3 722 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 ZNF624Q9P2J8 865 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 STOML1Q9UBI4 398 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 MARCOQ9UEW3 520 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 CIDEBQ9UHD4 219 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 TLK1Q9UKI8 766 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 RUVBL2Q9Y230 463 aaKnown RBP9.6□□□□□ -0.87
PSEN1-213ENST00000555386 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
PSEN1-213ENST00000555386 KIR2DS5A0A0G2JLQ3 304 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 A0A0G2JNG1 304 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 FAM149AA5PLN7 773 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 A6NCN8 305 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 G3V2L1 256 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 KIR2DS3K7RE56 304 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 IFRD1O00458 451 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ZNF195O14628 629 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 DIAPH2O60879 1101 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 KCNJ13O60928 360 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ESR1P03372 595 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 RPLP0P05388 317 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ENO1P06733 434 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 GLB1P16278 677 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 TYRP1P17643 537 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 SPINK2P20155 84 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 RPS3P23396 243 aaKnown RBP eCLIP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ACP1P24666 158 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 GABRB3P28472 473 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 CRABP2P29373 138 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 CD151P48509 253 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 KPNA2P52292 529 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 CCL7P80098 99 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 DMPKQ09013 629 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 PRKG2Q13237 762 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 KIR2DS5Q14953 304 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 PLCL1Q15111 1095 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 TSNAXIP1Q2TAA8 658 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 TRMT5Q32P41 509 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 RBM20Q5T481 1227 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 XKR5Q6UX68 686 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ZYG11AQ6WRX3 759 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 USP53Q70EK8 1073 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 NET1Q7Z628 596 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 GALNT7Q86SF2 657 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 PIM3Q86V86 326 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 LMNTD2Q8IXW0 634 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 NAT6Q93015 286 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 AHCYL2Q96HN2 611 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ELMO2Q96JJ3 720 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 PANX3Q96QZ0 392 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 HGH1Q9BTY7 390 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 RDH14Q9HBH5 336 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 OXSMQ9NWU1 459 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ARMCX1Q9P291 453 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ACSL5Q9ULC5 683 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ATXN7L1Q9ULK2 861 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 TDRKHQ9Y2W6 561 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 LRRC42Q9Y546 428 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 PCDHB1Q9Y5F3 818 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 PCM1Q15154 2024 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 C17orf113A0A1B0GUU1 675 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 OR5K4A6NMS3 321 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 SLCO1B7G3V0H7 640 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 LIN7AO14910 233 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 SLC22A2O15244 555 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 HYAL3O43820 417 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 LYPLA1O75608 230 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 CIB2O75838 187 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 HSPA4LO95757 839 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 MTHFD1P11586 935 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 MPSTP25325 297 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 AOAHP28039 575 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 LEPRP48357 1165 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 IDH3AP50213 366 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ALDH18A1P54886 795 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ZRSR2Q15696 482 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 SNAP47Q5SQN1 464 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 LIPMQ5VYY2 423 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 EPGNQ6UW88 154 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ABRAXAS1Q6UWZ7 409 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 GLRX5Q86SX6 157 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 SCUBE1Q8IWY4 988 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 PLD6Q8N2A8 252 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ZBTB2Q8N680 514 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 RBM15BQ8NDT2 890 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ASZ1Q8WWH4 475 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 STMN2Q93045 179 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 CMTM5Q96DZ9 223 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 GPR21Q99679 349 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 SLC30A3Q99726 388 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 NRTNQ99748 197 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 EBF4Q9BQW3 602 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms