RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PSIP1O75475 530 aaKnown RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 KLF7O75840 302 aaPredicted RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 CEACAM4O75871 244 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 CATP04040 527 aaKnown RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 CBSLP0DN79 551 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 PIM1P11309 404 aaPredicted RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 CBSP35520 551 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 CLCN7P51798 805 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 RRADP55042 308 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 RPS18P62269 152 aaKnown RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 DCDP81605 110 aaKnown RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 RELAQ04206 551 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 KLRB1Q12918 225 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 IL10RAQ13651 578 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 PTK6Q13882 451 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 SSPNQ14714 243 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 PPP1R7Q15435 360 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 SF1Q15637 639 aaKnown RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 PAPD7Q5XG87 772 aaKnown RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 LCN10Q6JVE6 187 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 LRRC8EQ6NSJ5 796 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 FIGLAQ6QHK4 219 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 MED25Q71SY5 747 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 RAB43Q86YS6 212 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 MCATQ8IVS2 390 aaKnown RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 TMEM102Q8N9M5 508 aaPredicted RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 OR9A1PQ8NGU1 263 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 SKA2Q8WVK7 121 aaPredicted RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 ZNF669Q96BR6 464 aaPredicted RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 PDLIM2Q96JY6 352 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 RUFY1Q96T51 708 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 FAM167BQ9BTA0 163 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 KLHL25Q9H0H3 589 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 CCDC68Q9H2F9 335 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 TXLNGQ9NUQ3 528 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.38□□□□□ -0.59
VRK1-204ENST00000555351 ANKMY1Q9P2S6 941 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 TLK1Q9UKI8 766 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 CRYL1Q9Y2S2 319 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 NFS1Q9Y697 457 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 SPTA1P02549 2419 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 TENM4Q6N022 2769 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 CTAGE9A4FU28 777 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 FITM1A5D6W6 292 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 DNALI1O14645 258 aaPredicted RBP11.37□□□□□ -0.59
VRK1-204ENST00000555351 HCRTR1O43613 425 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 KLHL41O60662 606 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 ALBP02768 609 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 MPC1LP0DKB6 136 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 PGAM1P18669 254 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 EMP3P54852 163 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 KCNC4Q03721 635 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 GRM7Q14831 915 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 FAM214AQ32MH5 1076 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 PTCHD3Q3KNS1 767 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 NKAIN1Q4KMZ8 207 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 FCRL6Q6DN72 434 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 MRPL14Q6P1L8 145 aaKnown RBP11.37□□□□□ -0.59
VRK1-204ENST00000555351 CNSTQ6PJW8 725 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 GALNT7Q86SF2 657 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
VRK1-204ENST00000555351 OR2L3Q8NG85 312 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 OR2A1Q8NGT9 310 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 OR2Y1Q8NGV0 311 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 FKBP10Q96AY3 582 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 RNF31Q96EP0 1072 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 IL17FQ96PD4 163 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 SPRTNQ9H040 489 aaPredicted RBP11.37□□□□□ -0.59
VRK1-204ENST00000555351 ING2Q9H160 280 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 CLMPQ9H6B4 373 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 WDR54Q9H977 334 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 ACSS2Q9NR19 701 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 RNF14Q9UBS8 474 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 GPN3Q9UHW5 284 aaPredicted RBP11.37□□□□□ -0.59
VRK1-204ENST00000555351 FBXO5Q9UKT4 447 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 G3BP2Q9UN86 482 aaKnown RBP11.37□□□□□ -0.59
VRK1-204ENST00000555351 TP53TG5Q9Y2B4 290 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 DHRS7Q9Y394 339 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 MAD1L1Q9Y6D9 718 aa11.37□□□□□ -0.59
VRK1-204ENST00000555351 A0A1B0GX78 115 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 A0A1W2PPV9 198 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 GOLGA8MH3BSY2 632 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 GFYI3L273 518 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 ZNF185O15231 689 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 IVDP26440 423 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 GRIA3P42263 894 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 SKIV2L2P42285 1042 aaKnown RBP11.36□□□□□ -0.59
VRK1-204ENST00000555351 PTGIRP43119 386 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 NFKB2Q00653 900 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 TLE1Q04724 770 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 KLHL38Q2WGJ6 581 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 DEFB110Q30KQ9 67 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 ACSBG2Q5FVE4 666 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 SPANXN3Q5MJ09 141 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 UGT3A1Q6NUS8 523 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 KIAA0408Q6ZU52 694 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 ASB18Q6ZVZ8 466 aa11.36□□□□□ -0.59
VRK1-204ENST00000555351 PTRH1Q86Y79 214 aaKnown RBP11.36□□□□□ -0.59
VRK1-204ENST00000555351 ZNF655Q8N720 491 aaPredicted RBP11.36□□□□□ -0.59
VRK1-204ENST00000555351 ASB11Q8WXH4 323 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms