RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 MFSD6Q6ZSS7 791 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 PHLDB2Q86SQ0 1253 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 FAM219AQ8IW50 185 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 CDK20Q8IZL9 346 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 ANKRD13CQ8N6S4 541 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 BMPERQ8N8U9 685 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 RASGEF1AQ8N9B8 481 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 OR11H4Q8NGC9 324 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 OCC1Q8TAD7 63 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 PHLDA1Q8WV24 401 aaPredicted RBP4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 HEXDCQ8WVB3 486 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 RAD54LQ92698 747 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZNF354BQ96LW1 612 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 RHNO1Q9BSD3 238 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 URM1Q9BTM9 101 aaKnown RBP4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 Q9H8V8 135 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 TRPV4Q9HBA0 871 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 DNAJC4Q9NNZ3 241 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 GSN-AS1Q9NRJ2 163 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 FGF21Q9NSA1 209 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZFP57Q9NU63 452 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 KCNG2Q9UJ96 466 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 WDR83OSQ9Y284 106 aa4.99□□□□□ -1.61
CKS1BP1-201ENST00000555221 FAM86B1E9PN63 330 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 ARPC2O15144 300 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 SLC7A4O43246 635 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 RPS6KA5O75582 802 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 PGLSO95336 258 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 TGDSO95455 350 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 FAM86B2P0C5J1 330 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 SPP1P10451 314 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 LIFP15018 202 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 TCF4P15884 667 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 CA4P22748 312 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 SOAT1P35610 550 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 RGS7P49802 495 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 MTCP1P56278 107 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 ILF2Q12905 390 aaKnown RBP4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZNF718Q3SXZ3 478 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZRANB3Q5FWF4 1079 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 SPDYCQ5MJ68 293 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 DCAF10Q5QP82 559 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 NOTUMQ6P988 496 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 SLC27A1Q6PCB7 646 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZNF771Q7L3S4 317 aaPredicted RBP4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 KLHL7Q8IXQ5 586 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 MMD2Q8IY49 270 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 LGI2Q8N0V4 545 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 ATAD1Q8NBU5 361 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 OR4K1Q8NGD4 311 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 FAM71F1Q96KD3 344 aaPredicted RBP4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 FAM20AQ96MK3 541 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 DOCK7Q96N67 2140 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 PSD2Q9BQI7 771 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 LAT2Q9GZY6 243 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 BICC1Q9H694 974 aaKnown RBP4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 SDR39U1Q9NRG7 319 aaPredicted RBP4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 CDH7Q9ULB5 785 aa4.98□□□□□ -1.61
CKS1BP1-201ENST00000555221 A0A1W2PPW3 197 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 C5orf52A6NGY3 159 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 CASTOR2A6NHX0 329 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 SLC30A4O14863 429 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 ATP6AP2O75787 350 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 SUPT20HL2P0C7V6 817 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 CA6P23280 308 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 DCTP40126 519 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 WNT5AP41221 380 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 RPL21P46778 160 aaKnown RBP4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 MFAP3P55082 362 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 CLDN15P56746 228 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 ARL16Q0P5N6 197 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 TNK1Q13470 666 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 RRS1Q15050 365 aaKnown RBP4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 NHSL2Q5HYW2 709 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 C19orf48Q6RUI8 117 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 NRARPQ7Z6K4 114 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 ISCA2Q86U28 154 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 TMCO5AQ8N6Q1 288 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 LMNTD1Q8N9Z9 388 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 TM9SF4Q92544 642 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 DNASE1L2Q92874 299 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 ALG14Q96F25 216 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 EPYCQ99645 322 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 SLC2A11Q9BYW1 496 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 MTMR12Q9C0I1 747 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 ZMYND12Q9H0C1 365 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 FLRT3Q9NZU0 649 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 ARMCX3Q9UH62 379 aaPredicted RBP4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 ITGA11Q9UKX5 1188 aa4.97□□□□□ -1.61
CKS1BP1-201ENST00000555221 OOEPA6NGQ2 149 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 DUXAA6NLW8 204 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 C2orf81A6NN90 581 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 H0YAE9 185 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 P2RY10O00398 339 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 DNM1LO00429 736 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 ATP6V0E1O15342 81 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 SNX3O60493 162 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 GSRP00390 522 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 EPORP19235 508 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 CDH3P22223 829 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms