RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 VPS26AO75436 327 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 GFAPP14136 432 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 IDO1P14902 403 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 SLC7A1P30825 629 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 SPEM2Q0P670 501 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 OR4D1Q15615 310 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 ATP13A5Q4VNC0 1218 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 RNF220Q5VTB9 566 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 UGT3A1Q6NUS8 523 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 UGT2A3Q6UWM9 527 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 FAM151BQ6UXP7 276 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 IQCHQ86VS3 1027 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 HEATR4Q86WZ0 1026 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 MIER2Q8N344 545 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 FBXO39Q8N4B4 442 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 ZUFSPQ96AP4 578 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 TEX101Q9BY14 249 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 EPB41L1Q9H4G0 881 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 RNF112Q9ULX5 631 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 AP4S1Q9Y587 144 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 WDFY3Q8IZQ1 3526 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 TCRBV3S1A0A5B6 114 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 TLR4O00206 839 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 CFIP05156 583 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 ZCCHC18P0CG32 403 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 SPAM1P38567 509 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 CLCQ05315 142 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 PPP1R3AQ16821 1122 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 PFKFB4Q16877 469 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 KIF19Q2TAC6 998 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 CLEC6AQ6EIG7 209 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 PAOXQ6QHF9 649 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 MINDY1Q8N5J2 469 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 TMEM102Q8N9M5 508 aaPredicted RBP16.93■□□□□ 0.3
SHOX-204ENST00000554971 ZFAND2BQ8WV99 257 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 TWIST2Q8WVJ9 160 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 APOOQ9BUR5 198 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 SPATA16Q9BXB7 569 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 TRIM15Q9C019 465 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 COPS7BQ9H9Q2 264 aaPredicted RBP16.93■□□□□ 0.3
SHOX-204ENST00000554971 SDR39U1Q9NRG7 319 aaPredicted RBP16.93■□□□□ 0.3
SHOX-204ENST00000554971 RXFP3Q9NSD7 469 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 GID8Q9NWU2 228 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 GMEB2Q9UKD1 530 aa16.93■□□□□ 0.3
SHOX-204ENST00000554971 GLYATL1P3A0A0U1RQE8 302 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 SMIM31A0A1B0GVY4 71 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 LNP1A1A4G5 178 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 TMEM202A6NGA9 273 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 UBXN8O00124 270 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 DNAJA2O60884 412 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 PRAMEF1O95521 474 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 RPS17P08708 135 aaKnown RBP16.92■□□□□ 0.3
SHOX-204ENST00000554971 ZNF806P0C7X5 589 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 PRSS56P0CW18 603 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 PKMP14618 531 aaKnown RBP16.92■□□□□ 0.3
SHOX-204ENST00000554971 TEAD1P28347 426 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 GPR1P46091 355 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 RABIFP47224 123 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 NXPH1P58417 271 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 CDK3Q00526 305 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 SF3A2Q15428 464 aaKnown RBP16.92■□□□□ 0.3
SHOX-204ENST00000554971 CHRNA6Q15825 494 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 LIN52Q52LA3 116 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 PAQR3Q6TCH7 311 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 ADAMTSL4Q6UY14 1074 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 TRIM74Q86UV6 250 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 TRAM1L1Q8N609 369 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 PNPLA1Q8N8W4 532 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 CEP76Q8TAP6 659 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 KLHDC7BQ96G42 594 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 COX14Q96I36 57 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 GPATCH1Q9BRR8 931 aaKnown RBP16.92■□□□□ 0.3
SHOX-204ENST00000554971 ZSCAN5AQ9BUG6 496 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 WDR26Q9H7D7 661 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 PACSIN3Q9UKS6 424 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 SNX11Q9Y5W9 270 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 SPTY2D1-AS1A0A0U1RR47 76 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 H3BMM5 538 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 CHEK2O96017 543 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 PABPC4LP0CB38 370 aaKnown RBP16.92■□□□□ 0.3
SHOX-204ENST00000554971 UGT1A6P19224 532 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 UGT1A1P22309 533 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 UGT1A4P22310 534 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 UGT1A3P35503 534 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 UGT1A5P35504 534 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 CTSKP43235 329 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 CDKN1CP49918 316 aaPredicted RBP16.92■□□□□ 0.3
SHOX-204ENST00000554971 BNIP2Q12982 314 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 PRAMEF14Q5SWL7 426 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 PHYKPLQ8IUZ5 450 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 FUNDC1Q8IVP5 155 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 KCNJ9Q92806 393 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 PDLIM5Q96HC4 596 aaKnown RBP16.92■□□□□ 0.3
SHOX-204ENST00000554971 PKP2Q99959 881 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 MUC13Q9H3R2 512 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 SEMA4GQ9NTN9 838 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 NCDNQ9UBB6 729 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 ABCD2Q9UBJ2 740 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 KLF15Q9UIH9 416 aa16.92■□□□□ 0.3
SHOX-204ENST00000554971 UBA6A0AVT1 1052 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms