RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 DDAH2O95865 285 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 LDLRP01130 860 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 IGHEP01854 428 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 PTMAP06454 111 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 MMP11P24347 488 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 COL8A1P27658 744 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 NKG7Q16617 165 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 CCSMST1Q4G0I0 132 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 IGFL2Q6UWQ7 119 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 TTLL10Q6ZVT0 673 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 IQCKQ8N0W5 287 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 DTWD1Q8N5C7 304 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 OR6P1Q8NGX9 317 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 OR2L8Q8NGY9 312 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 CFAP61Q8NHU2 1237 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 C1orf54Q8WWF1 131 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 ASZ1Q8WWH4 475 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 SPSB2Q99619 263 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 SLC29A3Q9BZD2 475 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 P2RY12Q9H244 342 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 SLC26A1Q9H2B4 701 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 SLC6A20Q9NP91 592 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 ATP13A2Q9NQ11 1180 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 CHRAC1Q9NRG0 131 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 MAP10Q9P2G4 905 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 PCDHGA10Q9Y5H3 936 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 CROCCQ5TZA2 2017 aa11.72□□□□□ -0.53
MTHFD1-207ENST00000554677 SCN3AQ9NY46 2000 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 A0A1B0GX78 115 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 FITM1A5D6W6 292 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 KRT87PA6NCN2 255 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 RASGRF2O14827 1237 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 DSCR3O14972 297 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 CTSVO60911 334 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 S1PR4O95977 384 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 IFNB1P01574 187 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 ALBP02768 609 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 ZSCAN5DPP0CG00 497 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 ARSFP54793 590 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 KIF5AQ12840 1032 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 AIMP2Q13155 320 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 SIX1Q15475 284 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 FASTKD1Q53R41 847 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 KIRREL2Q6UWL6 708 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 UNC5DQ6UXZ4 953 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 PPP1R21Q6ZMI0 780 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 NLRP9Q7RTR0 991 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 TAX1BP1Q86VP1 789 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 SLC13A5Q86YT5 568 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 DCUN1D3Q8IWE4 304 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 ZADH2Q8N4Q0 377 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 DENND1AQ8TEH3 1009 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 DLG3Q92796 817 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 PEX13Q92968 403 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 FKBP10Q96AY3 582 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 NACC2Q96BF6 587 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 TTC1Q99614 292 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 MESP1Q9BRJ9 268 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 WDR54Q9H977 334 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 RAB6BQ9NRW1 208 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 TREX1Q9NSU2 369 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 CUTCQ9NTM9 273 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 FBXL4Q9UKA2 621 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 KLK4Q9Y5K2 254 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 HS3ST3B1Q9Y662 390 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 NFS1Q9Y697 457 aa11.71□□□□□ -0.53
MTHFD1-207ENST00000554677 A0A1W2PPV9 198 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 VSTM2BA6NLU5 285 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 TARM1B6A8C7 271 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 PRMT5O14744 637 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 GPR37O15354 613 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 CD3EAPO15446 510 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 KDM1AO60341 852 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 NRP2O60462 931 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 IPO13O94829 963 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 C1orf105O95561 183 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 ALPPP05187 535 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 APOA4P06727 396 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 RPL22P35268 128 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 OR1D4P47884 311 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 YBX1P67809 324 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 PRAMEP78395 509 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 Q0VFX4 171 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 SNX1Q13596 522 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 SF1Q15637 639 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 HIF1AQ16665 826 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 CYP2A13Q16696 494 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 PCID2Q5JVF3 399 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 YOD1Q5VVQ6 348 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 PRAMEF13Q5VWM6 474 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 GAS2L3Q86XJ1 694 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 RNF10Q8N5U6 811 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 ZUFSPQ96AP4 578 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 SLC22A18Q96BI1 424 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 FRMD8P1Q9BZ68 369 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 CATSPERZQ9NTU4 200 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 IRAK4Q9NWZ3 460 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 CTSFQ9UBX1 484 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms