RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 MAP3K3Q99759 626 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 WDR83Q9BRX9 315 aaKnown RBP7.49□□□□□ -1.21
ABCD4-220ENST00000553998 OR2AG1Q9H205 316 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 ZNF552Q9H707 407 aaPredicted RBP7.49□□□□□ -1.21
ABCD4-220ENST00000553998 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 UGT1A7Q9HAW7 530 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 UGT1A10Q9HAW8 530 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 UGT1A8Q9HAW9 530 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 CATSPERZQ9NTU4 200 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 ZDHHC3Q9NYG2 299 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 MAP10Q9P2G4 905 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 TMPRSS11EQ9UL52 423 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 SNX7Q9UNH6 387 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 CHMP2BQ9UQN3 213 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 BTRCQ9Y297 605 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 VPS9D1Q9Y2B5 631 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 NTNG1Q9Y2I2 539 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 PCDHGA10Q9Y5H3 936 aa7.49□□□□□ -1.21
ABCD4-220ENST00000553998 TACC2O95359 2948 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 ITPR3Q14573 2671 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 ARHGAP10A1A4S6 786 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 OR5K3A6NET4 321 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 TLCD2A6NGC4 264 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 A6NL46 340 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 OR52A4PA6NMU1 304 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 PDZK1P1A8MUH7 402 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 QSOX1O00391 747 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 CD3EAPO15446 510 aaKnown RBP7.48□□□□□ -1.21
ABCD4-220ENST00000553998 LRRTM2O43300 516 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 AP2A2O94973 939 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 TUBBP07437 444 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 GSTM1P09488 218 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 RHOXF2BP0C7M4 288 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 RPL10P27635 214 aaKnown RBP7.48□□□□□ -1.21
ABCD4-220ENST00000553998 ECHS1P30084 290 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 NSG1P42857 185 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 ADARP55265 1226 aaKnown RBP7.48□□□□□ -1.21
ABCD4-220ENST00000553998 PER3P56645 1201 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 GSTM4Q03013 218 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 DMPKQ09013 629 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 TMEM115Q12893 351 aaPredicted RBP7.48□□□□□ -1.21
ABCD4-220ENST00000553998 ILF2Q12905 390 aaKnown RBP7.48□□□□□ -1.21
ABCD4-220ENST00000553998 THOC5Q13769 683 aaKnown RBP7.48□□□□□ -1.21
ABCD4-220ENST00000553998 NAA30Q147X3 362 aaPredicted RBP7.48□□□□□ -1.21
ABCD4-220ENST00000553998 MYBPC3Q14896 1274 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 SLMAPQ14BN4 828 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 DBN1Q16643 649 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 INSCQ1MX18 579 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 TYSND1Q2T9J0 566 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 BCL7AQ4VC05 210 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 NEPROQ6NW34 567 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 CES3Q6UWW8 571 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 PACS1Q6VY07 963 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 UNC5AQ6ZN44 842 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 KIAA0408Q6ZU52 694 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 LRRTM4Q86VH4 590 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 KCNMB4Q86W47 210 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 SERPINA9Q86WD7 417 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 LRRC6Q86X45 466 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 IGDCC3Q8IVU1 814 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 PIANPQ8IYJ0 282 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 ZBED8Q8IZ13 594 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 GSDMBQ8TAX9 411 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 ZFPM2Q8WW38 1151 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 IFT81Q8WYA0 676 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 CXorf40BQ96DE9 158 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 PWWP2AQ96N64 755 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 IP6K3Q96PC2 410 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 DPH2Q9BQC3 489 aaPredicted RBP7.48□□□□□ -1.21
ABCD4-220ENST00000553998 RHOXF2Q9BQY4 288 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 FAM167BQ9BTA0 163 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 DHRS4Q9BTZ2 278 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 OSGEPL1Q9H4B0 414 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 SYTL2Q9HCH5 934 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 SAYSD1Q9NPB0 183 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 AGPAT4Q9NRZ5 378 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 C20orf96Q9NUD7 363 aaPredicted RBP7.48□□□□□ -1.21
ABCD4-220ENST00000553998 PCMTD2Q9NV79 361 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 WDR37Q9Y2I8 494 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 DNMT3AQ9Y6K1 912 aaPredicted RBP7.48□□□□□ -1.21
ABCD4-220ENST00000553998 MTORP42345 2549 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 PIKFYVEQ9Y2I7 2098 aa7.48□□□□□ -1.21
ABCD4-220ENST00000553998 OR51F1A6NGY5 319 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 H3BMM5 538 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 E2F3O00716 465 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 PRMT5O14744 637 aaPredicted RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 GPR39O43194 453 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 MTX2O75431 263 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 BANF1O75531 89 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 KLF7O75840 302 aaPredicted RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 IPO13O94829 963 aaKnown RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 ZBTB11O95625 1053 aaPredicted RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 IGHEP01854 428 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 ALPPP05187 535 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 STSP08842 583 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 EDN3P14138 238 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 ATP1B2P14415 290 aaPredicted RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 VCLP18206 1134 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 RPS3P23396 243 aaKnown RBP eCLIP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 MCM3P25205 808 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms