RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 H3BM21 787 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 STX16-NPEPL1H3BU86 382 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 TLR4O00206 839 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 STX16O14662 325 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 TNFRSF10CO14798 259 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 HIST1H2AGP0C0S8 130 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-208ENST00000553868 FGF3P11487 239 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-208ENST00000553868 HIST1H2ADP20671 130 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 CYP2A7P20853 494 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 RXRGP48443 463 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 SEC24CP53992 1094 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 CLDN2P57739 230 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 FOXK1P85037 733 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 BST1Q10588 318 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 TERF2Q15554 542 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 CYHR1Q6ZMK1 362 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 GCNT7Q6ZNI0 430 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 CFAP206Q8IYR0 622 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 SLC22A15Q8IZD6 547 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 KIRREL3Q8IZU9 778 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 TMEM145Q8NBT3 493 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 OR56A4Q8NGH8 313 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 LIN37Q96GY3 246 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-208ENST00000553868 HIST1H2AHQ96KK5 128 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 C7orf26Q96N11 449 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 HIST1H2AJQ99878 128 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 H2AFJQ9BTM1 129 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 DPEP2Q9H4A9 486 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 COG4Q9H9E3 785 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 ZNHIT2Q9UHR6 403 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 CENPEQ02224 2701 aa14.08□□□□□ -0.16
SHMT2-208ENST00000553868 ZFC3H1O60293 1989 aaKnown RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 POM121BA6NF01 834 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 UBXN8O00124 270 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 NDUFAB1O14561 156 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 NPHS1O60500 1241 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 EDF1O60869 148 aaKnown RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 CATP04040 527 aaKnown RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 CEACAM5P06731 702 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 TROVE2P10155 538 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 IMPDH1P20839 514 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 DRD4P21917 467 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 MAP4P27816 1152 aaKnown RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 SLC1A6P48664 564 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 NAGLUP54802 743 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 ALDH18A1P54886 795 aaKnown RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 ABCE1P61221 599 aaKnown RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 HERVK_113P63132 956 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 CDKL1Q00532 357 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 DMPKQ09013 629 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 TGFBIQ15582 683 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 NAPRTQ6XQN6 538 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 UBE2R2Q712K3 238 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 ABI3BPQ7Z7G0 1075 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 DCP2Q8IU60 420 aaKnown RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 CRLF3Q8IUI8 442 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 ZNF547Q8IVP9 402 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 TCAIMQ8N3R3 496 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 SLC25A45Q8N413 288 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 CCNYL1Q8N7R7 359 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 PTGR2Q8N8N7 351 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 MCOLN3Q8TDD5 553 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 BCAS4Q8TDM0 211 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 ASB11Q8WXH4 323 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 L3HYPDHQ96EM0 354 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 SCARF2Q96GP6 870 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 CNDP1Q96KN2 507 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 BMFQ96LC9 184 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 CCT8L2Q96SF2 557 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 TRMOQ9BU70 441 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 GATA5Q9BWX5 397 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 SLC12A9Q9BXP2 914 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 ERVK-6Q9BXR3 956 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 FAM107BQ9H098 131 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 PARVBQ9HBI1 364 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 FGFR1OP2Q9NVK5 253 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 FAM8A1Q9UBU6 413 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 MOSPD1Q9UJG1 213 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 TSR3Q9UJK0 312 aaKnown RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 ACSL5Q9ULC5 683 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 CDYLQ9Y232 598 aa14.07□□□□□ -0.16
SHMT2-208ENST00000553868 TNPO3Q9Y5L0 923 aaKnown RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 COL27A1Q8IZC6 1860 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-208ENST00000553868 PRSS38A1L453 326 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 CDRT15L2A8MXV6 281 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 GFYI3L273 518 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 FFAR2O15552 330 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 KLK8O60259 260 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 SNNO75324 88 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-208ENST00000553868 MATN4O95460 622 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 HSPA4LO95757 839 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 RPN2P04844 631 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 ANXA5P08758 320 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 MTHFD2P13995 350 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 KCNC1P48547 511 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 AP1S2P56377 157 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 RIPPLY3P57055 190 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 RCN2Q14257 317 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 TGIF1Q15583 401 aa14.06□□□□□ -0.16
SHMT2-208ENST00000553868 PFKFB4Q16877 469 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms