RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ZBTB14O43829 449 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 PRAMEF10O60809 474 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 NIPSNAP2O75323 286 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 SMNDC1O75940 238 aaKnown RBP eCLIP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 SLCO2B1O94956 709 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 CBSLP0DN79 551 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 ERVK-10P10266 1014 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 LIPCP11150 499 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 FGF3P11487 239 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 ENO3P13929 434 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 ACADLP28330 430 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 ATP5DP30049 168 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 CBSP35520 551 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 LEPRP48357 1165 aaKnown RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 RAB28P51157 221 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 SLC12A2P55011 1212 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 HSD11B2P80365 405 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 MRPS25P82663 173 aaKnown RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 CFHR1Q03591 330 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 MGAT5Q09328 741 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 IL11RAQ14626 422 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 GLE1Q53GS7 698 aaKnown RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 CTSL3PQ5NE16 218 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 DUPD1Q68J44 220 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 CNSTQ6PJW8 725 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 UNC5AQ6ZN44 842 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 MICALCLQ6ZW33 695 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 ZNF572Q7Z3I7 529 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 SYT9Q86SS6 491 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 PPP1R3BQ86XI6 285 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 GPATCH11Q8N954 259 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 ZSCAN1Q8NBB4 408 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 LKAAEAR1Q8TD35 194 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 HNRNPLLQ8WVV9 542 aaKnown RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 KIAA1143Q96AT1 154 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 FAM136AQ96C01 138 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 VPS39Q96JC1 886 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 BIRC8Q96P09 236 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 MAP3K3Q99759 626 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 SLC7A5P2Q9GIP4 190 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 CLEC4MQ9H2X3 399 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 XKR8Q9H6D3 395 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 SYTL2Q9HCH5 934 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 C1GALT1Q9NS00 363 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 INTS7Q9NVH2 962 aaKnown RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 OCIAD1Q9NX40 245 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 OGFRQ9NZT2 677 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 KLHL42Q9P2K6 505 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 RARRES3Q9UL19 164 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 CORO1CQ9ULV4 474 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-209ENST00000553855 PCDHGA3Q9Y5H0 932 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 PTPRBP23467 1997 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 A0A087WV48 116 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 CDC14CA4D256 554 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 EIF3FO00303 357 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 BTN3A1O00481 513 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 TLX3O43711 291 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 KIF1CO43896 1103 aaKnown RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 BANF1O75531 89 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 SPAG6O75602 509 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 HAUS5O94927 633 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 SYF2O95926 243 aaKnown RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 MT-ND3P03897 115 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 GSTA2P09210 222 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 HIST1H2AGP0C0S8 130 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 NELFEP18615 380 aaKnown RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 HIST1H2ADP20671 130 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 CYP2A7P20853 494 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 PRDX3P30048 256 aaKnown RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 HSD17B2P37059 387 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 ETV5P41161 510 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 TMPRSS3P57727 454 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 MPP1Q00013 466 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 GUCY2DQ02846 1103 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 TUBB3Q13509 450 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 FRG1Q14331 258 aaKnown RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 KIR2DS3Q14952 304 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 NAA25Q14CX7 972 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 ZNF658BQ4V348 819 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 MANEAQ5SRI9 462 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 ZNF468Q5VIY5 522 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 ANKS6Q68DC2 871 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 FAM45BPQ6NSW5 357 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 NEK10Q6ZWH5 1172 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 MYO1HQ8N1T3 1032 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 IL22RA1Q8N6P7 574 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 C2CD4AQ8NCU7 369 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-209ENST00000553855 OR8K5Q8NH50 307 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 FAM45AQ8TCE6 357 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 KLHL6Q8WZ60 621 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 HIST1H2AHQ96KK5 128 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 PWWP2AQ96N64 755 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 OR6C1Q96RD1 312 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 HIST1H2AJQ99878 128 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 H2AFJQ9BTM1 129 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 EFHD1Q9BUP0 239 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 TRIM54Q9BYV2 358 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 FAM129AQ9BZQ8 928 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms