RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 IMPACTQ9P2X3 320 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 SUCOQ9UBS9 1254 aaKnown RBP8.69□□□□□ -1.02
SYNE2-209ENST00000553308 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.69□□□□□ -1.02
SYNE2-209ENST00000553308 MYO7BQ6PIF6 2116 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 TRAV17A0A0B4J275 112 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 DYTNA2CJ06 578 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 KCNN4O15554 427 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 NRP2O60462 931 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 CELA2AP08217 269 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 PRR35P0CG20 571 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 TPH1P17752 444 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 MST1P26927 711 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 SOX11P35716 441 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 NSG1P42857 185 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 CA7P43166 264 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 TNFSF10P50591 281 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 RAB28P51157 221 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 ITIH4Q14624 930 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 TCEAL1Q15170 157 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 INAQ16352 499 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 CCDC181Q5TID7 509 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 YOD1Q5VVQ6 348 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-209ENST00000553308 FIGLAQ6QHK4 219 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 TMEM207Q6UWW9 146 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 ARHGEF18Q6ZSZ5 1173 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 TMTC1Q8IUR5 882 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 VRK3Q8IV63 474 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 CDKL3Q8IVW4 592 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-209ENST00000553308 RCOR2Q8IZ40 523 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 ZNF295-AS1Q8N0V1 137 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 SIRT6Q8N6T7 355 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 TTC29Q8NA56 475 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-209ENST00000553308 STT3BQ8TCJ2 826 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 BRIX1Q8TDN6 353 aaKnown RBP8.68□□□□□ -1.02
SYNE2-209ENST00000553308 DENND1AQ8TEH3 1009 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 PSMF1Q92530 271 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 KRT35Q92764 455 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 CDKN2AIPNLQ96HQ2 116 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 VPS50Q96JG6 964 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 SPATA13Q96N96 652 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 ZNF285Q96NJ3 590 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 SELENOSQ9BQE4 189 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 NHEJ1Q9H9Q4 299 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-209ENST00000553308 ARNT2Q9HBZ2 717 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 CHST11Q9NPF2 352 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 PIH1D1Q9NWS0 290 aaKnown RBP8.68□□□□□ -1.02
SYNE2-209ENST00000553308 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-209ENST00000553308 STOX2Q9P2F5 926 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-209ENST00000553308 C3orf18Q9UK00 162 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 ALG6Q9Y672 507 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 CNTRLQ7Z7A1 2325 aa8.68□□□□□ -1.02
SYNE2-209ENST00000553308 NSG1A0A0A6YYJ2 146 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 FITM1A5D6W6 292 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 QSOX1O00391 747 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 KDM1AO60341 852 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 OR1I1O60431 355 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 CTSVO60911 334 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 WISP2O76076 250 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 USP1O94782 785 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 S1PR4O95977 384 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 ZGLP1P0C6A0 271 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 RBP3P10745 1247 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 COX6A1P12074 109 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 CD9P21926 228 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 PSMB5P28074 263 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 FOXN2P32314 431 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 CARSP49589 748 aaKnown RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 VSX2P58304 361 aaPredicted RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 EIF3EP60228 445 aaKnown RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 KRTAP10-9P60411 292 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 PMP22Q01453 160 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 EEF1A2Q05639 463 aaKnown RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 GRB7Q14451 532 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 POU6F1Q14863 301 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 DNAJC21Q5F1R6 531 aaKnown RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 VWA2Q5GFL6 755 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 ZC3H12BQ5HYM0 836 aaKnown RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 TCTE1Q5JU00 501 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 ATG9BQ674R7 924 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 KCTD11Q693B1 232 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 FRMPD2BQ6IN97 320 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 PACS1Q6VY07 963 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 RPTNQ6XPR3 784 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 KLHDC8BQ8IXV7 354 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 KBTBD2Q8IY47 623 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 SLC22A15Q8IZD6 547 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 CPAMD8Q8IZJ3 1885 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 AMER2Q8N7J2 671 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 LKAAEAR1Q8TD35 194 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 STYXQ8WUJ0 223 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 MIEF2Q96C03 454 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 CCDC42Q96M95 316 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 ZNF304Q9HCX3 659 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 LUC7LQ9NQ29 371 aaKnown RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 ABHD10Q9NUJ1 306 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 INTS7Q9NVH2 962 aaKnown RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 ZNHIT6Q9NWK9 470 aaKnown RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 ABI3Q9P2A4 366 aa8.67□□□□□ -1.02
SYNE2-209ENST00000553308 ZNF282Q9UDV7 671 aaPredicted RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 SEC14L3Q9UDX4 400 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms