RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 KRT6AP02538 564 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 KRT6BP04259 564 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 HIST1H2AGP0C0S8 130 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 PABPC1P11940 636 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 TYRP14679 529 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 HIST1H2ADP20671 130 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 EFNA1P20827 205 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 KRT6CP48668 564 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 RPS14P62263 151 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 NTHL1P78549 312 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 DYNC1I2Q13409 638 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 RBBP5Q15291 538 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 LY6G5CQ5SRR4 150 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 ADNP2Q6IQ32 1131 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 GDPD4Q6W3E5 623 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 TMEM179BQ7Z7N9 219 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 PATL1Q86TB9 770 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 LMNTD1Q8N9Z9 388 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 OSCP1Q8WVF1 389 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 HIST1H2AHQ96KK5 128 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 FAM210AQ96ND0 272 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 HIST1H2AJQ99878 128 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 H2AFJQ9BTM1 129 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 CPEB1Q9BZB8 566 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 GORASP2Q9H8Y8 452 aa13.8□□□□□ -0.2
CALCOCO1-218ENST00000550804 KCNE1BA0A087WTH5 132 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 CXCR6O00574 342 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 FOXD2O60548 495 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 BMP10O95393 424 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 CST1P01037 141 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 ALPLP05186 524 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 CD22P20273 847 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 SHMT2P34897 504 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 EPHA5P54756 1037 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 TUBA4AP68366 448 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 MAD2L1Q13257 205 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 ABRAXAS1Q6UWZ7 409 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 USP51Q70EK9 711 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 GALNT10Q86SR1 603 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 CLVS1Q8IUQ0 354 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 MTERF1Q99551 399 aaKnown RBP13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 NPLQ9BXD5 320 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 MTCL1Q9Y4B5 1905 aaKnown RBP13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 A0A087WXM4 84 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 FADS2P1A8MWK0 482 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 GMNNO75496 209 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 PRSS23O95084 383 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 CTSLP07711 333 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 CBSLP0DN79 551 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 EPCAMP16422 314 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 PTPN2P17706 415 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 SDC1P18827 310 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 PTPN6P29350 595 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 CBSP35520 551 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 HALP42357 657 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 CDK9P50750 372 aaKnown RBP13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 PFN3P60673 137 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 PON2Q15165 354 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 KCTD21Q4G0X4 260 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 GLB1L3Q8NCI6 653 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 ELMO1Q92556 727 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 IRF7Q92985 503 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 NCLNQ969V3 563 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 FAM162AQ96A26 154 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 RIOK2Q9BVS4 552 aaKnown RBP13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 NAA50Q9GZZ1 169 aaKnown RBP13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 FAM83DQ9H4H8 585 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 SLC25A13Q9UJS0 675 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 WNT6Q9Y6F9 365 aa13.79□□□□□ -0.2
CALCOCO1-218ENST00000550804 USP34Q70CQ2 3546 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 TRBV5-3A0A0A0MS03 114 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 GRXCR1A8MXD5 290 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 C5orf67F2Z3F1 127 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 G3V2T6 193 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 GFYI3L273 518 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 NUAK1O60285 661 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 DEAF1O75398 565 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 CDK4P11802 303 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 PFKLP17858 780 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 S100A3P33764 101 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 PIGAP37287 484 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 SLC6A12P48065 614 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 PREPP48147 710 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 CLDN8P56748 225 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 UBE3AQ05086 875 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 CHIT1Q13231 466 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 DDX39BQ13838 428 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 LAPTM4AQ15012 233 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 ZNF697Q5TEC3 545 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 OR4F3Q6IEY1 312 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 ANKRD26P1Q6NSI1 321 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 PRR23BQ6ZRT6 265 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 OR7A2PQ8NGA2 310 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 ERLEC1Q96DZ1 483 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 ZNF641Q96N77 438 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 C19orf43Q9BQ61 176 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 PCDH12Q9NPG4 1184 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 TRANK1O15050 2925 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 REV3LO60673 3130 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms