RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 CSNK2BP67870 215 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 SRSF11Q05519 484 aaKnown RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 C2orf80Q0P641 193 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 COQ5Q5HYK3 327 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 LGI4Q8N135 537 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 CACTIN-AS1Q8N1I8 211 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 TBC1D15Q8TC07 691 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 FUBP1Q96AE4 644 aaKnown RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 ACDQ96AP0 544 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 BBS4Q96RK4 519 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 TREX1Q9NSU2 369 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 TMEM248Q9NWD8 314 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 MAP10Q9P2G4 905 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 USP3Q9Y6I4 520 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 AREL1O15033 823 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 ACOX3O15254 700 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 PRAMEF11O60813 436 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 IFNW1P05000 195 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 FGF4P08620 206 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 RPL17P18621 184 aaKnown RBP9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 ERVPABLB-1P60509 514 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 RAPSNQ13702 412 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 CLCA4Q14CN2 919 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 PON2Q15165 354 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 RFTN2Q52LD8 501 aaPredicted RBP9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 IFI44LQ53G44 452 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 GCNT6Q5T4J0 391 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 FUNDC1Q8IVP5 155 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 ARHGAP12Q8IWW6 846 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 OR10T2Q8NGX3 314 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 ZFP90Q8TF47 636 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 PIK3R3Q92569 461 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 KCNJ9Q92806 393 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 TMCO6Q96DC7 493 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 YME1L1Q96TA2 773 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 CLEC4MQ9H2X3 399 aaPredicted RBP9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 PLAC1Q9HBJ0 212 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 POPDC3Q9HBV1 291 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 TRPV5Q9NQA5 729 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 MAPRE3Q9UPY8 281 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 CFL2Q9Y281 166 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 EVPLQ92817 2033 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 UPK3BL1B0FP48 263 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 UPK3BL2E5RIL1 263 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 HAS3O00219 553 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 EPOP01588 193 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 C9P02748 559 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 GRIK2Q13002 908 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 RCAN2Q14206 197 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 CCL14Q16627 93 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 ZNF792Q3KQV3 632 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 SETMARQ53H47 684 aaPredicted RBP9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 CYBRD1Q53TN4 286 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 C2orf73Q8N5S3 287 aaPredicted RBP9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 ASZ1Q8WWH4 475 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 POLR2J2Q9GZM3 115 aaKnown RBP9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 NLE1Q9NVX2 485 aaPredicted RBP9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 KLHL28Q9NXS3 571 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 VAPAQ9P0L0 249 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 FNIP2Q9P278 1114 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 PTGFRNQ9P2B2 879 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 PCTPQ9UKL6 214 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 FZD4Q9ULV1 537 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 SLC22A14Q9Y267 594 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 HOXA2O43364 376 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 GABBR2O75899 941 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 GADD45GO95257 159 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 HPRP00739 348 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 GGT1P19440 569 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 PRPS1L1P21108 318 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 ASMTP46597 345 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 CDKN1CP49918 316 aaPredicted RBP9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 TSTQ16762 297 aaKnown RBP9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 Q6ZNX1 250 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 CNTN4Q8IWV2 1026 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 TBC1D19Q8N5T2 526 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 NPLOC4Q8TAT6 608 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 NDNFQ8TB73 568 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 SOCS4Q8WXH5 440 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 TMEM203Q969S6 136 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 SH3YL1Q96HL8 342 aaPredicted RBP9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 FNDC11Q9BVV2 318 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 TMLHEQ9NVH6 421 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 ING3Q9NXR8 418 aa9.98□□□□□ -0.81
SMARCC2-209ENST00000550164 A0A0U1RQS6 177 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 HTR3EA5X5Y0 456 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 TPST2O60704 377 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 MTX2O75431 263 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 GSRP00390 522 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 SHMT2P34897 504 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 DCTP40126 519 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 KCNC1P48547 511 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 TUBA1BP68363 451 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 RPP38P78345 283 aaKnown RBP9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 FAM189BP81408 668 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 PTSQ03393 145 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 HKDC1Q2TB90 917 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 DDI2Q5TDH0 399 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 PAQR9Q6ZVX9 377 aa9.97□□□□□ -0.81
SMARCC2-209ENST00000550164 USP50Q70EL3 339 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms