RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-205ENST00000550013 EPN1Q9Y6I3 576 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-205ENST00000550013 CSMD1Q96PZ7 3565 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 TCRBV7S2A1N4TA0A589 114 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 IQCF5A8MTL0 148 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 PSMD3O43242 534 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 GPC4O75487 556 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 ALBP02768 609 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 PTMAP06454 111 aaKnown RBP14.76□□□□□ -0.05
RAB5C-205ENST00000550013 PIM1P11309 404 aaPredicted RBP14.76□□□□□ -0.05
RAB5C-205ENST00000550013 CD9P21926 228 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 TSFMP43897 325 aaKnown RBP14.76□□□□□ -0.05
RAB5C-205ENST00000550013 Q0VFX4 171 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 CDC16Q13042 620 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 ZNF169Q14929 603 aaPredicted RBP14.76□□□□□ -0.05
RAB5C-205ENST00000550013 RBBP7Q16576 425 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 TUBB8Q3ZCM7 444 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 IRAK1BP1Q5VVH5 260 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 AFTPHQ6ULP2 937 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 ZNF534Q76KX8 674 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 DCUN1D3Q8IWE4 304 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 SRRM1Q8IYB3 904 aaKnown RBP14.76□□□□□ -0.05
RAB5C-205ENST00000550013 OR2L8Q8NGY9 312 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 SLC35B2Q8TB61 432 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 ZNF778Q96MU6 729 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 SELENOSQ9BQE4 189 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 LHPPQ9H008 270 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 PACSIN2Q9UNF0 486 aaPredicted RBP14.76□□□□□ -0.05
RAB5C-205ENST00000550013 MAU2Q9Y6X3 613 aa14.76□□□□□ -0.05
RAB5C-205ENST00000550013 GOLGA6L9A6NEM1 432 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 MED26O95402 600 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 S1PR4O95977 384 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 TNFRSF8P28908 595 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 GRIA1P42261 906 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 KLF1Q13351 362 aaPredicted RBP14.75□□□□□ -0.05
RAB5C-205ENST00000550013 GRM7Q14831 915 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 SF1Q15637 639 aaKnown RBP14.75□□□□□ -0.05
RAB5C-205ENST00000550013 TSTD2Q5T7W7 516 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 LINC00696Q6ZRV3 163 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 LINC00523Q86TU6 105 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 KRT222Q8N1A0 295 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 DNAAF3Q8N9W5 541 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 OR11G2Q8NGC1 345 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 FAR1Q8WVX9 515 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 SLC22A18Q96BI1 424 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 THOC3Q96J01 351 aaKnown RBP14.75□□□□□ -0.05
RAB5C-205ENST00000550013 CALR3Q96L12 384 aaKnown RBP14.75□□□□□ -0.05
RAB5C-205ENST00000550013 ZNF285Q96NJ3 590 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 TRIM5Q9C035 493 aa14.75□□□□□ -0.05
RAB5C-205ENST00000550013 MRM3Q9HC36 420 aaKnown RBP14.75□□□□□ -0.05
RAB5C-205ENST00000550013 INTS7Q9NVH2 962 aaKnown RBP14.75□□□□□ -0.05
RAB5C-205ENST00000550013 MYO7BQ6PIF6 2116 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 HEATR9A2RTY3 570 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 KRT87PA6NCN2 255 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 VSTM2BA6NLU5 285 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 BTNL10A8MVZ5 291 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 RASGRF2O14827 1237 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 PRICKLE3O43900 615 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-205ENST00000550013 NRP2O60462 931 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 ZG16O60844 167 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 CTSVO60911 334 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 KLHL18O94889 574 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 RPN2P04844 631 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 EDN3P14138 238 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 PTMSP20962 102 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 PSMB5P28074 263 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 VSX2P58304 361 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-205ENST00000550013 CDH17Q12864 832 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 ZC3H12BQ5HYM0 836 aaKnown RBP14.74□□□□□ -0.05
RAB5C-205ENST00000550013 TCTE1Q5JU00 501 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 YOD1Q5VVQ6 348 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-205ENST00000550013 UNC5DQ6UXZ4 953 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 LDB1Q86U70 411 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-205ENST00000550013 PRSS58Q8IYP2 241 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 TTC29Q8NA56 475 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-205ENST00000550013 ACRBPQ8NEB7 543 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 CATSPER1Q8NEC5 780 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 OR6P1Q8NGX9 317 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 OR4L1Q8NH43 312 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 DENND1AQ8TEH3 1009 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 ASZ1Q8WWH4 475 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 ATG4AQ8WYN0 398 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 TTC1Q99614 292 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 CARD6Q9BX69 1037 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 EPS8L2Q9H6S3 715 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 ETNK1Q9HBU6 452 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 NXT1Q9UKK6 140 aaKnown RBP14.74□□□□□ -0.05
RAB5C-205ENST00000550013 SLC39A10Q9ULF5 831 aa14.74□□□□□ -0.05
RAB5C-205ENST00000550013 ARHGAP10A1A4S6 786 aa14.73□□□□□ -0.05
RAB5C-205ENST00000550013 FITM1A5D6W6 292 aa14.73□□□□□ -0.05
RAB5C-205ENST00000550013 F8W8V4 182 aa14.73□□□□□ -0.05
RAB5C-205ENST00000550013 APOA4P06727 396 aa14.73□□□□□ -0.05
RAB5C-205ENST00000550013 PRF1P14222 555 aa14.73□□□□□ -0.05
RAB5C-205ENST00000550013 AOAHP28039 575 aa14.73□□□□□ -0.05
RAB5C-205ENST00000550013 PER3P56645 1201 aa14.73□□□□□ -0.05
RAB5C-205ENST00000550013 ACVR1Q04771 509 aa14.73□□□□□ -0.05
RAB5C-205ENST00000550013 TLR1Q15399 786 aa14.73□□□□□ -0.05
RAB5C-205ENST00000550013 ZRSR2Q15696 482 aaKnown RBP14.73□□□□□ -0.05
RAB5C-205ENST00000550013 CCSMST1Q4G0I0 132 aa14.73□□□□□ -0.05
RAB5C-205ENST00000550013 FASTKD1Q53R41 847 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms