RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 A0A0G2JNG1 304 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 C17orf113A0A1B0GUU1 675 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 KIR2DS3K7RE56 304 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 LIN7AO14910 233 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-227ENST00000548080 B4GAT1O43505 415 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 HSPA4LO95757 839 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 SERPINB5P36952 375 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 UBE2IP63279 158 aaKnown RBP16.88■□□□□ 0.29
HDAC7-227ENST00000548080 PLOD1Q02809 727 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-227ENST00000548080 RCN2Q14257 317 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 KIR2DS5Q14953 304 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 TGFBIQ15582 683 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 RPE65Q16518 533 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 ABRAXAS1Q6UWZ7 409 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 SPATA21Q7Z572 469 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 SLC9B2Q86UD5 537 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 SKA2Q8WVK7 121 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-227ENST00000548080 CXorf40BQ96DE9 158 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 L3HYPDHQ96EM0 354 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 SEC16BQ96JE7 1060 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 CNDP1Q96KN2 507 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 C12orf66Q96MD2 445 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 TMEM237Q96Q45 408 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 INSM2Q96T92 566 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-227ENST00000548080 SORT1Q99523 831 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 TBC1D10AQ9BXI6 508 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 LRRN3Q9H3W5 708 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 RDH14Q9HBH5 336 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 CD274Q9NZQ7 290 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 ADAMTS6Q9UKP5 1117 aa16.88■□□□□ 0.29
HDAC7-227ENST00000548080 STX16-NPEPL1H3BU86 382 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 STX16O14662 325 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 SLC16A5O15375 505 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 KCNJ13O60928 360 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 MT-CO3P00414 261 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 VIPP01282 170 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 S100BP04271 92 aaPredicted RBP16.87■□□□□ 0.29
HDAC7-227ENST00000548080 C8GP07360 202 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 SLC35G4P0C7Q5 338 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 TROVE2P10155 538 aaKnown RBP eCLIP16.87■□□□□ 0.29
HDAC7-227ENST00000548080 SLC2A4P14672 509 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 JUPP14923 745 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 ARRB2P32121 409 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 HALP42357 657 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 ALDH18A1P54886 795 aaKnown RBP16.87■□□□□ 0.29
HDAC7-227ENST00000548080 HERVK_113P63132 956 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 E2F1Q01094 437 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 SF3A3Q12874 501 aaKnown RBP eCLIP16.87■□□□□ 0.29
HDAC7-227ENST00000548080 PPP1R3AQ16821 1122 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 ZNF678Q5SXM1 525 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 USP53Q70EK8 1073 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 TMPRSS9Q7Z410 1059 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 OR6C4Q8NGE1 309 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 ASB11Q8WXH4 323 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 SLC38A3Q99624 504 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 ERVK-6Q9BXR3 956 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 TRIM55Q9BYV6 548 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 ACSS2Q9NR19 701 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 KCNK4Q9NYG8 393 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 KIF26BQ2KJY2 2108 aa16.87■□□□□ 0.29
HDAC7-227ENST00000548080 SNUPNO95149 360 aaKnown RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 FASLGP48023 281 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 TARDBPQ13148 414 aaKnown RBP eCLIP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 SP140Q13342 867 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 SPIDRQ14159 915 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 UNC50Q53HI1 259 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 ARL13AQ5H913 290 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 WASH2PQ6VEQ5 465 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 ATG14Q6ZNE5 492 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 TMPRSS7Q7RTY8 843 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 ZNF438Q7Z4V0 828 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 B3GNT8Q7Z7M8 397 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 SLC22A15Q8IZD6 547 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 CACNA2D3Q8IZS8 1091 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 CCDC197Q8NCU1 140 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 DLG3Q92796 817 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 MOCOSQ96EN8 888 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 GFM1Q96RP9 751 aaKnown RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 NRTNQ99748 197 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 NUDT22Q9BRQ3 303 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 SLC12A9Q9BXP2 914 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 TRIM54Q9BYV2 358 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 ZMYND15Q9H091 742 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 OR52A5Q9H2C5 316 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 WASH6PQ9NQA3 447 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 UTP6Q9NYH9 597 aaKnown RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 KLHL14Q9P2G3 628 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 ACSL5Q9ULC5 683 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 KNTC1P50748 2209 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 IGHV1OR21-1A0A087WYE8 117 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 KLHL33A6NCF5 533 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 NCF1BA6NI72 391 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 OR5K4A6NMS3 321 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 NCF1CA8MVU1 366 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 GFYI3L273 518 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 NTN3O00634 580 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 ENO2P09104 434 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 NCF1P14598 390 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 XRCC1P18887 633 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 MPSTP25325 297 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms