RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 PTERQ96BW5 349 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 FAM136AQ96C01 138 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 PANX3Q96QZ0 392 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 C17orf62Q9BQA9 187 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 MRM3Q9HC36 420 aaKnown RBP12.81□□□□□ -0.36
CPSF6-204ENST00000547486 TXLNGQ9NUQ3 528 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 GPR83Q9NYM4 423 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 NDOR1Q9UHB4 597 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 SLC39A10Q9ULF5 831 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 SOX13Q9UN79 622 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 SRPK3Q9UPE1 567 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 PCDHGB7Q9Y5F8 929 aa12.81□□□□□ -0.36
CPSF6-204ENST00000547486 A0A1W2PPV9 198 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 AP3B1O00203 1094 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 NRP2O60462 931 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 CTSVO60911 334 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 NIPSNAP2O75323 286 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 VPS4BO75351 444 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 F7P08709 466 aaPredicted RBP12.8□□□□□ -0.36
CPSF6-204ENST00000547486 VPS41P49754 854 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 RRADP55042 308 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 CDK16Q00536 496 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 FASTKQ14296 549 aaKnown RBP12.8□□□□□ -0.36
CPSF6-204ENST00000547486 GBX1Q14549 363 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 KCNJ11Q14654 390 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 INPP5JQ15735 1006 aaPredicted RBP12.8□□□□□ -0.36
CPSF6-204ENST00000547486 DCAF10Q5QP82 559 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 ANKRD22Q5VYY1 191 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 SLC6A19Q695T7 634 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 TTC27Q6P3X3 843 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 CNSTQ6PJW8 725 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 CAND1Q86VP6 1230 aaKnown RBP12.8□□□□□ -0.36
CPSF6-204ENST00000547486 DTWD1Q8N5C7 304 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 OR2A1Q8NGT9 310 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 SKA2Q8WVK7 121 aaPredicted RBP12.8□□□□□ -0.36
CPSF6-204ENST00000547486 ZUFSPQ96AP4 578 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 RAD51AP1Q96B01 352 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 ZNF285Q96NJ3 590 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 ENAMQ9NRM1 1142 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 P4HTMQ9NXG6 502 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 IL1RAPL1Q9NZN1 696 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 TSR3Q9UJK0 312 aaKnown RBP12.8□□□□□ -0.36
CPSF6-204ENST00000547486 VPS4AQ9UN37 437 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 CRYL1Q9Y2S2 319 aa12.8□□□□□ -0.36
CPSF6-204ENST00000547486 TARM1B6A8C7 271 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 KPNA5O15131 536 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 DPM1O60762 260 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 MED26O95402 600 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 MATN4O95460 622 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 ONECUT2O95948 504 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 MAGEA6P43360 314 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 GPS1Q13098 491 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 TYSND1Q2T9J0 566 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 PLEKHN1Q494U1 663 aaPredicted RBP12.79□□□□□ -0.36
CPSF6-204ENST00000547486 ZC3H12BQ5HYM0 836 aaKnown RBP12.79□□□□□ -0.36
CPSF6-204ENST00000547486 FRMPD2BQ6IN97 320 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 MRNIPQ6NTE8 343 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 TTC23LQ6PF05 361 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 CENPUQ71F23 418 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 COX15Q7KZN9 410 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 OVCH1Q7RTY7 1134 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 SDCCAG8Q86SQ7 713 aaPredicted RBP12.79□□□□□ -0.36
CPSF6-204ENST00000547486 GALNT16Q8N428 558 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 OTUD6BQ8N6M0 293 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 GALNT11Q8NCW6 608 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 TRIM58Q8NG06 486 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 OR2L3Q8NG85 312 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 GSDMBQ8TAX9 411 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 HMGCLL1Q8TB92 370 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 C19orf60Q96EN9 201 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 MS4A14Q96JA4 679 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 FER1L6-AS2Q96M78 137 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 IP6K3Q96PC2 410 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 PSMG3-AS1Q96PY0 264 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 MIPEPQ99797 713 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 ZNF552Q9H707 407 aaPredicted RBP12.79□□□□□ -0.36
CPSF6-204ENST00000547486 ZBTB20Q9HC78 741 aaPredicted RBP12.79□□□□□ -0.36
CPSF6-204ENST00000547486 HOMER3Q9NSC5 361 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 CUTCQ9NTM9 273 aa12.79□□□□□ -0.36
CPSF6-204ENST00000547486 STOX2Q9P2F5 926 aaPredicted RBP12.79□□□□□ -0.36
CPSF6-204ENST00000547486 FER1L5A0AVI2 2057 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-204ENST00000547486 LOC105369274A0A096LPK9 316 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 LOC102723532A0A0G2JNH3 316 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 A0A1B0GX78 115 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 FITM1A5D6W6 292 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 PEX12O00623 359 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 DSCR3O14972 297 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 KRT14P02533 472 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 CD63P08962 238 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 CHRM3P20309 590 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 OR1D4P47884 311 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 ARSFP54793 590 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 VSX2P58304 361 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-204ENST00000547486 GRM7Q14831 915 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 MYBPC3Q14896 1274 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 NKG7Q16617 165 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 CYP2A13Q16696 494 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 ACSBG2Q5FVE4 666 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms