RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 EFHD1Q9BUP0 239 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 UNKQ9C0B0 810 aaKnown RBP11.73□□□□□ -0.53
HDAC7-226ENST00000547259 TMBIM4Q9HC24 238 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 IMP3Q9NV31 184 aaKnown RBP11.73□□□□□ -0.53
HDAC7-226ENST00000547259 SENP1Q9P0U3 644 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.73□□□□□ -0.53
HDAC7-226ENST00000547259 TUBD1Q9UJT1 453 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 RUVBL2Q9Y230 463 aaKnown RBP11.73□□□□□ -0.53
HDAC7-226ENST00000547259 WDR37Q9Y2I8 494 aa11.73□□□□□ -0.53
HDAC7-226ENST00000547259 A6NCN8 305 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 PABPN1LA6NDY0 278 aaKnown RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 NPEPPSL1A6NEC2 478 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 C9orf172C9J069 976 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 COPEO14579 308 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 CASC3O15234 703 aaKnown RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 ATP8B1O43520 1251 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 GLRA3O75311 464 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 EML2O95834 649 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 TSPAN12O95859 305 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 COL6A2P12110 1019 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 CD1DP15813 335 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 KRT4P19013 534 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 ALDH4A1P30038 563 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 CSTF2P33240 577 aaKnown RBP eCLIP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 SLC26A3P40879 764 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 MAPK9P45984 424 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 KPNA2P52292 529 aaKnown RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 ATP6V0D1P61421 351 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 GPLD1P80108 840 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 ABRQ12979 859 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 FAM83EQ2M2I3 478 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 TSNAXIP1Q2TAA8 658 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 AMZ1Q400G9 498 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 AGBL2Q5U5Z8 902 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 CAPRIN2Q6IMN6 1127 aaKnown RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 DUS1LQ6P1R4 473 aaKnown RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 KLC3Q6P597 504 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 BORAQ6PGQ7 559 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 UNC5DQ6UXZ4 953 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 WASH2PQ6VEQ5 465 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 ZFAND4Q86XD8 727 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 TRIM48Q8IWZ4 208 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 CENPLQ8N0S6 344 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 SPATA6LQ8N4H0 392 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 IL22RA1Q8N6P7 574 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 OR4D9Q8NGE8 314 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 NXNL1Q96CM4 212 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 CXorf40BQ96DE9 158 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 PDLIM5Q96HC4 596 aaKnown RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 APOPT1Q96IL0 206 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 PKNOX2Q96KN3 472 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 UBXN10Q96LJ8 280 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 TEFMQ96QE5 360 aaKnown RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 INSM2Q96T92 566 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 DDA1Q9BW61 102 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 DERL2Q9GZP9 239 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 SEMA6CQ9H3T2 930 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 NMRAL1Q9HBL8 299 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 WASH6PQ9NQA3 447 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 IGSF5Q9NSI5 407 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 SCHIP1Q9P0W5 487 aaPredicted RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 ASF1AQ9Y294 204 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 HEBP2Q9Y5Z4 205 aa11.72□□□□□ -0.53
HDAC7-226ENST00000547259 CFAP20Q9Y6A4 193 aaKnown RBP11.72□□□□□ -0.53
HDAC7-226ENST00000547259 TRBV23OR9-2A0A075B6M9 112 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 KIR2DS5A0A0G2JLQ3 304 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 A0A0G2JNG1 304 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 OR5K4A6NMS3 321 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 OR52A4PA6NMU1 304 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 KIR2DS3K7RE56 304 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 BTN3A1O00481 513 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 B4GAT1O43505 415 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 ZBTB14O43829 449 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 KLHL2O95198 593 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 CATP04040 527 aaKnown RBP11.71□□□□□ -0.53
HDAC7-226ENST00000547259 RPN2P04844 631 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 C8GP07360 202 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 FAM87AP0C7U9 286 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 MTHFD1P11586 935 aaKnown RBP11.71□□□□□ -0.53
HDAC7-226ENST00000547259 BRAFP15056 766 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 TFEBP19484 476 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 CYP2A7P20853 494 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 ACADLP28330 430 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 ETV5P41161 510 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 BDKRB1P46663 353 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 GLRBP48167 497 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 DLG1Q12959 904 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 SP140Q13342 867 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 KRT33BQ14525 404 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 KIR2DS5Q14953 304 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 CLCA4Q14CN2 919 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 C16orf72Q14CZ0 275 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 RPE65Q16518 533 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 FRA10AC1Q70Z53 315 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 UBE2R2Q712K3 238 aaPredicted RBP11.71□□□□□ -0.53
HDAC7-226ENST00000547259 NAGSQ8N159 534 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 PLD6Q8N2A8 252 aaKnown RBP11.71□□□□□ -0.53
HDAC7-226ENST00000547259 SLC37A2Q8TED4 501 aa11.71□□□□□ -0.53
HDAC7-226ENST00000547259 PATE1Q8WXA2 126 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms