RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 BORAQ6PGQ7 559 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 ZNF517Q6ZMY9 492 aaPredicted RBP15.31■□□□□ 0.04
DDX54-204ENST00000546898 ZNF572Q7Z3I7 529 aaPredicted RBP15.31■□□□□ 0.04
DDX54-204ENST00000546898 TAX1BP1Q86VP1 789 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 DSELQ8IZU8 1212 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 LMNTD1Q8N9Z9 388 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 OR9A1PQ8NGU1 263 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 DENND1AQ8TEH3 1009 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 SEC14L1Q92503 715 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 CLIP3Q96DZ5 547 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 CFAP36Q96G28 342 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 PWWP2AQ96N64 755 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 ARHGAP9Q9BRR9 750 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 GPR87Q9BY21 358 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.31■□□□□ 0.04
DDX54-204ENST00000546898 TRMT6Q9UJA5 497 aaKnown RBP15.31■□□□□ 0.04
DDX54-204ENST00000546898 TSR3Q9UJK0 312 aaKnown RBP15.31■□□□□ 0.04
DDX54-204ENST00000546898 AP1M2Q9Y6Q5 423 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 ANKRD12Q6UB98 2062 aa15.31■□□□□ 0.04
DDX54-204ENST00000546898 ZNF839A8K0R7 811 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 RAD51CO43502 376 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 OR2B3O76000 313 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 RORAP35398 523 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 HSD17B2P37059 387 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 SKIV2L2P42285 1042 aaKnown RBP15.3■□□□□ 0.04
DDX54-204ENST00000546898 CKAP4Q07065 602 aaKnown RBP15.3■□□□□ 0.04
DDX54-204ENST00000546898 C2orf54Q08AI8 447 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 PDIA2Q13087 525 aaKnown RBP15.3■□□□□ 0.04
DDX54-204ENST00000546898 CUL1Q13616 776 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 SF1Q15637 639 aaKnown RBP15.3■□□□□ 0.04
DDX54-204ENST00000546898 DEFB110Q30KQ9 67 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 LINC00303Q3SY05 128 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 TEDDM1Q5T9Z0 273 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 DNAJC22Q8N4W6 341 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 C2orf73Q8N5S3 287 aaPredicted RBP15.3■□□□□ 0.04
DDX54-204ENST00000546898 SLC38A9Q8NBW4 561 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 MR1Q95460 341 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 MED8Q96G25 268 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 DPH2Q9BQC3 489 aaPredicted RBP15.3■□□□□ 0.04
DDX54-204ENST00000546898 SLC7A5P2Q9GIP4 190 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 PPANQ9NQ55 473 aaKnown RBP15.3■□□□□ 0.04
DDX54-204ENST00000546898 PCMTD2Q9NV79 361 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 TAS2R13Q9NYV9 303 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 PLCL2Q9UPR0 1127 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 KLK4Q9Y5K2 254 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 MRPS18BQ9Y676 258 aaKnown RBP15.3■□□□□ 0.04
DDX54-204ENST00000546898 CFAP46Q8IYW2 2715 aa15.3■□□□□ 0.04
DDX54-204ENST00000546898 KALRNO60229 2985 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 TARM1B6A8C7 271 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 H3BMH7 237 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 MEN1O00255 615 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 EIF3HO15372 352 aaKnown RBP eCLIP15.29■□□□□ 0.04
DDX54-204ENST00000546898 NKX2-8O15522 239 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 KATNA1O75449 491 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 AHSGP02765 367 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 GABRB3P28472 473 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 RGS4P49798 205 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 RPS15P62841 145 aaKnown RBP15.29■□□□□ 0.04
DDX54-204ENST00000546898 LY6DQ14210 128 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 ZC3H12BQ5HYM0 836 aaKnown RBP15.29■□□□□ 0.04
DDX54-204ENST00000546898 HP1BP3Q5SSJ5 553 aaPredicted RBP15.29■□□□□ 0.04
DDX54-204ENST00000546898 PRAMEF17Q5VTA0 474 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 TLDC1Q6P9B6 456 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 ANKMY2Q8IV38 441 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 CPNE9Q8IYJ1 553 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 FBXO36Q8NEA4 188 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 ASB11Q8WXH4 323 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 SMPDL3AQ92484 453 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 ZUFSPQ96AP4 578 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 NDNQ99608 321 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 RAB17Q9H0T7 212 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 DPH5Q9H2P9 285 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 ZFATQ9P243 1243 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 SRPK3Q9UPE1 567 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 SPTA1P02549 2419 aa15.29■□□□□ 0.04
DDX54-204ENST00000546898 MDC1Q14676 2089 aaKnown RBP15.28■□□□□ 0.04
DDX54-204ENST00000546898 A0A1W2PPV9 198 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 KRT87PA6NCN2 255 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 GFYI3L273 518 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 ZSCAN9O15535 394 aaPredicted RBP15.28■□□□□ 0.04
DDX54-204ENST00000546898 ZNF749O43361 778 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 ZBTB14O43829 449 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 CREG1O75629 220 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 RAB40ALP0C0E4 278 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 PRKAR1AP10644 381 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 SFTPCP11686 197 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 PTPN4P29074 926 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 MGAT5Q09328 741 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 RBM20Q5T481 1227 aaKnown RBP15.28■□□□□ 0.04
DDX54-204ENST00000546898 DUPD1Q68J44 220 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 FAM45BPQ6NSW5 357 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 RHBDD2Q6NTF9 364 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 C16orf46Q6P387 395 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 FAM199XQ6PEV8 388 aaPredicted RBP15.28■□□□□ 0.04
DDX54-204ENST00000546898 TRMT10BQ6PF06 316 aaKnown RBP15.28■□□□□ 0.04
DDX54-204ENST00000546898 FIGLAQ6QHK4 219 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 CYHR1Q6ZMK1 362 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 FAM20CQ8IXL6 584 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 SYTL1Q8IYJ3 562 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 ZBED8Q8IZ13 594 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms