RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 FTSJ1Q9UET6 329 aa6.18□□□□□ -1.42
PRKDC-211ENST00000546304 KLHL3Q9UH77 587 aa6.18□□□□□ -1.42
PRKDC-211ENST00000546304 TRMT6Q9UJA5 497 aaKnown RBP6.18□□□□□ -1.42
PRKDC-211ENST00000546304 ACSL5Q9ULC5 683 aa6.18□□□□□ -1.42
PRKDC-211ENST00000546304 U3KQA8 63 aa6.18□□□□□ -1.42
PRKDC-211ENST00000546304 WDFY3Q8IZQ1 3526 aa6.18□□□□□ -1.42
PRKDC-211ENST00000546304 ADAMTS20P59510 1910 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 ASPMQ8IZT6 3477 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 KIR2DS5A0A0G2JLQ3 304 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 A0A0G2JNG1 304 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 SLC5A10A0PJK1 596 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CCDC151A5D8V7 595 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 OR52A4PA6NMU1 304 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 KIR2DS3K7RE56 304 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 IFRD1O00458 451 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 KPNA5O15131 536 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CTIFO43310 598 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 SH3BP5O60239 455 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CBFA2T3O75081 653 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 FAM155BO75949 473 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 AHSGP02765 367 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 INHBAP08476 426 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 ITGA2BP08514 1039 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 MTHFD1P11586 935 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CKMT1AP12532 417 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 ENO3P13929 434 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 BRAFP15056 766 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 ZNF37AP17032 561 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CHRM3P20309 590 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CCR7P32248 378 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 SPRP35270 261 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 HSD17B3P37058 310 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 FASLGP48023 281 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CDKN2DP55273 166 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 UBE2IP63279 158 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 PLOD1Q02809 727 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 BMPR2Q13873 1038 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 GBX1Q14549 363 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 KIR2DS5Q14953 304 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 BRD3Q15059 726 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 NR0B2Q15466 257 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 C14orf28Q4W4Y0 310 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 PLEKHS1Q5SXH7 462 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 HECTD2Q5U5R9 776 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 DUS1LQ6P1R4 473 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 GUSBP11Q6P575 273 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 NAPRTQ6XQN6 538 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 DBX2Q6ZNG2 339 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 VRK3Q8IV63 474 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 TRIM48Q8IWZ4 208 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CPNE9Q8IYJ1 553 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CFAP206Q8IYR0 622 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 SLC22A15Q8IZD6 547 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 NAGSQ8N159 534 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 MREGQ8N565 214 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 AVL9Q8NBF6 648 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 SIDT2Q8NBJ9 832 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 DEFB124Q8NES8 71 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 GPR156Q8NFN8 814 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 MYRIPQ8NFW9 859 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 MAPK15Q8TD08 544 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 SKA2Q8WVK7 121 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 ASZ1Q8WWH4 475 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 SLC44A1Q8WWI5 657 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 NAT6Q93015 286 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CXorf40BQ96DE9 158 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 MRRFQ96E11 262 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CCDC120Q96HB5 630 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CNDP2Q96KP4 475 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 APOLD1Q96LR9 279 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 C12orf66Q96MD2 445 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CAMK1GQ96NX5 476 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 GPR22Q99680 433 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CDC6Q99741 560 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 OLFM1Q99784 485 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 DHRS4Q9BTZ2 278 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 ASPNQ9BXN1 380 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 WWP1Q9H0M0 922 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 TRIT1Q9H3H1 467 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 STN1Q9H668 368 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 TAS2R13Q9NYV9 303 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 KLHL42Q9P2K6 505 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 PSMD13Q9UNM6 376 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 RUVBL2Q9Y230 463 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CDYLQ9Y232 598 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 WDR37Q9Y2I8 494 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CFAP20Q9Y6A4 193 aaKnown RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 IKBKGQ9Y6K9 419 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-211ENST00000546304 PTPRBP23467 1997 aa6.17□□□□□ -1.42
PRKDC-211ENST00000546304 CHD8Q9HCK8 2581 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 KIF26BQ2KJY2 2108 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 LILRA5A6NI73 299 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SLC22A31A6NKX4 558 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 OR5K4A6NMS3 321 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 POC1B-GALNT4F8VUJ3 575 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 EIF3FO00303 357 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-211ENST00000546304 RGS13O14921 159 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 NUDT21O43809 227 aaKnown RBP6.16□□□□□ -1.42
PRKDC-211ENST00000546304 ERLIN1O75477 346 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms