RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 FAM169AQ9Y6X4 670 aa9□□□□□ -0.97
YBX3-218ENST00000546298 GOLGA6L10A0A0M3HER8 536 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 FAM237BA0A1B0GVD1 139 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 A0A1B0GX78 115 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 ZNF839A8K0R7 811 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 E5RI56 91 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 HCRTR1O43613 425 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 VPS4BO75351 444 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 ONECUT2O95948 504 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 ALBP02768 609 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 PDGFAP04085 211 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 ALPPP05187 535 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 PKMP14618 531 aaKnown RBP8.99□□□□□ -0.97
YBX3-218ENST00000546298 ARNTP27540 789 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 HSD17B2P37059 387 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 COILP38432 576 aaPredicted RBP8.99□□□□□ -0.97
YBX3-218ENST00000546298 GRIA3P42263 894 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 BDKRB1P46663 353 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 CD97P48960 835 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 MLLT10P55197 1068 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 DHX34Q14147 1143 aaKnown RBP8.99□□□□□ -0.97
YBX3-218ENST00000546298 UBAP2LQ14157 1087 aaKnown RBP8.99□□□□□ -0.97
YBX3-218ENST00000546298 KCNJ11Q14654 390 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 ANKRD20A4Q4UJ75 823 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 COLEC12Q5KU26 742 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 CTSL3PQ5NE16 218 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 VWA5B1Q5TIE3 1220 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 CNSTQ6PJW8 725 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 TTLL10Q6ZVT0 673 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 FAM20CQ8IXL6 584 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 LMNTD2Q8IXW0 634 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 RASGEF1CQ8N431 466 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 CLEC1AQ8NC01 280 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 FDCSPQ8NFU4 85 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 GABPB2Q8TAK5 448 aaPredicted RBP8.99□□□□□ -0.97
YBX3-218ENST00000546298 CALML6Q8TD86 181 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 GRK7Q8WTQ7 553 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 SMPDL3AQ92484 453 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 FKBP10Q96AY3 582 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 BIRC8Q96P09 236 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 SELENOSQ9BQE4 189 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 CCDC68Q9H2F9 335 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 CUTCQ9NTM9 273 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 INTS10Q9NVR2 710 aaKnown RBP8.99□□□□□ -0.97
YBX3-218ENST00000546298 UTP6Q9NYH9 597 aaKnown RBP8.99□□□□□ -0.97
YBX3-218ENST00000546298 KLHL42Q9P2K6 505 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 CIDEBQ9UHD4 219 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 NXT1Q9UKK6 140 aaKnown RBP8.99□□□□□ -0.97
YBX3-218ENST00000546298 VPS4AQ9UN37 437 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 PLAAQ9Y263 795 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 KLHL20Q9Y2M5 609 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 CRYL1Q9Y2S2 319 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 LAMA5O15230 3695 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 NBEAQ8NFP9 2946 aa8.99□□□□□ -0.97
YBX3-218ENST00000546298 TCRBV7S3A2A0A539 114 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 CTAGE9A4FU28 777 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 A6NL46 340 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 GOLGA8KD6RF30 607 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 GOLGA8TH3BQL2 631 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 PGRMC1O00264 195 aaKnown RBP8.98□□□□□ -0.97
YBX3-218ENST00000546298 DSCR3O14972 297 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 ZSCAN12O43309 604 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 PRICKLE3O43900 615 aaPredicted RBP8.98□□□□□ -0.97
YBX3-218ENST00000546298 PHF2O75151 1096 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 NIPSNAP2O75323 286 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 AVILO75366 819 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 IPO13O94829 963 aaKnown RBP8.98□□□□□ -0.97
YBX3-218ENST00000546298 MATN4O95460 622 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 CATP04040 527 aaKnown RBP8.98□□□□□ -0.97
YBX3-218ENST00000546298 ITGAXP20702 1163 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 CMPK1P30085 196 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 TERF1P54274 439 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 GBX1Q14549 363 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 ARHGAP19Q14CB8 494 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 CYP2A13Q16696 494 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 DCAF10Q5QP82 559 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 FAM69BQ5VUD6 431 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 FCRL6Q6DN72 434 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
YBX3-218ENST00000546298 CCDC137Q6PK04 289 aaKnown RBP8.98□□□□□ -0.97
YBX3-218ENST00000546298 NEK10Q6ZWH5 1172 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 OVCH1Q7RTY7 1134 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 CILP2Q8IUL8 1156 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 FAM26EQ8N5C1 309 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 GALNT11Q8NCW6 608 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 OR2L3Q8NG85 312 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 OR9A1PQ8NGU1 263 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 CPT1CQ8TCG5 803 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 TM9SF4Q92544 642 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 ZNF669Q96BR6 464 aaPredicted RBP8.98□□□□□ -0.97
YBX3-218ENST00000546298 ZNF285Q96NJ3 590 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 SMAD5Q99717 465 aaKnown RBP8.98□□□□□ -0.97
YBX3-218ENST00000546298 MIPEPQ99797 713 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 WDR54Q9H977 334 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 ATP13A2Q9NQ11 1180 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 SLAMF7Q9NQ25 335 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 ENAMQ9NRM1 1142 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 P4HTMQ9NXG6 502 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 KLK4Q9Y5K2 254 aa8.98□□□□□ -0.97
YBX3-218ENST00000546298 NFS1Q9Y697 457 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms