RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 RAD51AP1Q96B01 352 aa20.28■□□□□ 0.84
SCARB1-210ENST00000545493 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.28■□□□□ 0.84
SCARB1-210ENST00000545493 IFT80Q9P2H3 777 aaPredicted RBP20.28■□□□□ 0.84
SCARB1-210ENST00000545493 GALPQ9UBC7 116 aa20.28■□□□□ 0.84
SCARB1-210ENST00000545493 NDOR1Q9UHB4 597 aa20.28■□□□□ 0.84
SCARB1-210ENST00000545493 NEU2Q9Y3R4 380 aa20.28■□□□□ 0.84
SCARB1-210ENST00000545493 KPNA5O15131 536 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 ZNF185O15231 689 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 SORBS2O94875 1100 aaKnown RBP20.27■□□□□ 0.84
SCARB1-210ENST00000545493 ESR1P03372 595 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 UMODP07911 640 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 ATP5DP30049 168 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 FOLR3P41439 243 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 CYP1B1Q16678 543 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 NKAIN1Q4KMZ8 207 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 FIGLAQ6QHK4 219 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 CENPUQ71F23 418 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 MED25Q71SY5 747 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 CILP2Q8IUL8 1156 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 MCATQ8IVS2 390 aaKnown RBP20.27■□□□□ 0.84
SCARB1-210ENST00000545493 SPNS2Q8IVW8 549 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 AGGF1Q8N302 714 aaeCLIP20.27■□□□□ 0.847e-7■■■■■ 27.5
SCARB1-210ENST00000545493 OR2Y1Q8NGV0 311 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 HMGCLL1Q8TB92 370 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 ZNF669Q96BR6 464 aaPredicted RBP20.27■□□□□ 0.84
SCARB1-210ENST00000545493 ZNF285Q96NJ3 590 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 SERPINB12Q96P63 405 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 NDC1Q9BTX1 674 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 ENAMQ9NRM1 1142 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 INTS7Q9NVH2 962 aaKnown RBP20.27■□□□□ 0.84
SCARB1-210ENST00000545493 SPATA7Q9P0W8 599 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 GPN3Q9UHW5 284 aaPredicted RBP20.27■□□□□ 0.84
SCARB1-210ENST00000545493 CRYL1Q9Y2S2 319 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 LRRK2Q5S007 2527 aa20.27■□□□□ 0.84
SCARB1-210ENST00000545493 A0A1W2PPV9 198 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 CLEC18AA5D8T8 446 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 CCNFP41002 786 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 GRIA3P42263 894 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 SRSF1Q07955 248 aaKnown RBP eCLIP20.26■□□□□ 0.83
SCARB1-210ENST00000545493 RAPSNQ13702 412 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 SF1Q15637 639 aaKnown RBP20.26■□□□□ 0.83
SCARB1-210ENST00000545493 ARMC3Q5W041 872 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 CLEC18BQ6UXF7 455 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 TTLL10Q6ZVT0 673 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 COX15Q7KZN9 410 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 PPP1R32Q7Z5V6 425 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 SDCCAG8Q86SQ7 713 aaPredicted RBP20.26■□□□□ 0.83
SCARB1-210ENST00000545493 CLEC18CQ8NCF0 446 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 GIMAP7Q8NHV1 300 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 MAGOHBQ96A72 148 aaKnown RBP20.26■□□□□ 0.83
SCARB1-210ENST00000545493 TCF12Q99081 682 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 JRKLQ9Y4A0 524 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 PCDHGB7Q9Y5F8 929 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 DOPEY2Q9Y3R5 2298 aa20.26■□□□□ 0.83
SCARB1-210ENST00000545493 A0A1B0GX78 115 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 A6NL46 340 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 ARHGEF33A8MVX0 844 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 H3BMM5 538 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 NRDCO43847 1150 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 CTSVO60911 334 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 FKBP9O95302 570 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 MATN4O95460 622 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 ERGP11308 486 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 PAMP19021 973 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 COILP38432 576 aaPredicted RBP20.25■□□□□ 0.83
SCARB1-210ENST00000545493 MAGEA3P43357 314 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 RRADP55042 308 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 YBX1P67809 324 aaKnown RBP20.25■□□□□ 0.83
SCARB1-210ENST00000545493 SARNPP82979 210 aaKnown RBP20.25■□□□□ 0.83
SCARB1-210ENST00000545493 DHX34Q14147 1143 aaKnown RBP20.25■□□□□ 0.83
SCARB1-210ENST00000545493 FASTKQ14296 549 aaKnown RBP20.25■□□□□ 0.83
SCARB1-210ENST00000545493 SSPNQ14714 243 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 ACSBG2Q5FVE4 666 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 ZNF470Q6ECI4 717 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 CASC4Q6P4E1 433 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 TTC23LQ6PF05 361 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 CCDC137Q6PK04 289 aaKnown RBP20.25■□□□□ 0.83
SCARB1-210ENST00000545493 DTWD1Q8N5C7 304 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 MCUQ8NE86 351 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 OR2L3Q8NG85 312 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 DLG3Q92796 817 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 PBKQ96KB5 322 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 FOPNLQ96NB1 174 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 SLC30A3Q99726 388 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 MIPEPQ99797 713 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 SELENOSQ9BQE4 189 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 GPR83Q9NYM4 423 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 MED16Q9Y2X0 877 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 ZNF451Q9Y4E5 1061 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 KLK4Q9Y5K2 254 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 MRFAP1Q9Y605 127 aa20.25■□□□□ 0.83
SCARB1-210ENST00000545493 SHANK1Q9Y566 2161 aa20.24■□□□□ 0.83
SCARB1-210ENST00000545493 ZCWPW2A0A1B0GU75 182 aa20.24■□□□□ 0.83
SCARB1-210ENST00000545493 FAM237BA0A1B0GVD1 139 aa20.24■□□□□ 0.83
SCARB1-210ENST00000545493 GOLGA8MH3BSY2 632 aa20.24■□□□□ 0.83
SCARB1-210ENST00000545493 MASP2O00187 686 aa20.24■□□□□ 0.83
SCARB1-210ENST00000545493 PGRMC1O00264 195 aaKnown RBP20.24■□□□□ 0.83
SCARB1-210ENST00000545493 MLNP12872 115 aa20.24■□□□□ 0.83
SCARB1-210ENST00000545493 PKMP14618 531 aaKnown RBP20.24■□□□□ 0.83
SCARB1-210ENST00000545493 UQCRFS1P47985 274 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms