RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 COPG1Q9Y678 874 aaKnown RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 NFS1Q9Y697 457 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 TMEM131LA2VDJ0 1609 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 PNPLA7Q6ZV29 1317 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 A0A1B0GW55 424 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 A0A1W2PQ27 194 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 A0A1W2PQ64 194 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 A0A1W2PQD8 194 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ZNF716A6NP11 495 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 WASHC1A8K0Z3 465 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 GSG1L2A8MUP6 293 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 WASH3PC4AMC7 463 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CES2O00748 559 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 LCE2BO14633 110 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ZNF263O14978 683 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 RGS16O15492 202 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 GPR39O43194 453 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PAPSS1O43252 624 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SUV39H1O43463 412 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 TGM5O43548 720 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 H2AFYO75367 372 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PDE8BO95263 885 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CELF2O95319 508 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 GOT2P00505 430 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 GH2P01242 217 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 IFNA7P01567 189 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CLEC3BP05452 202 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 UGT2B4P06133 528 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ASGR2P07307 311 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CSF1RP07333 972 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ZNF735P0CB33 412 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DUX4L2P0CJ85 424 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DUX4L3P0CJ86 424 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DUX4L4P0CJ87 422 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DUX4L5P0CJ88 424 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DUX4L6P0CJ89 424 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DUX4L7P0CJ90 424 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 NCF1P14598 390 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 LBPP18428 481 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 C4BPBP20851 252 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 LPOP22079 712 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PSMA5P28066 241 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 GNA15P30679 374 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 HSD17B3P37058 310 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ETV4P43268 484 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 RPS5P46782 204 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 HSPA7P48741 367 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CLCN7P51798 805 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ITGA1P56199 1179 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 NUTF2P61970 127 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ERVK-25P63136 954 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CD300CQ08708 224 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 EPS8Q12929 822 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 STRN3Q13033 797 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 BTN1A1Q13410 526 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PDK1Q15118 436 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PCBP1Q15365 356 aaKnown RBP eCLIP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 GRK1Q15835 563 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 KCNMB1Q16558 191 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 GOLGA7BQ2TAP0 167 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 FLYWCH1Q4VC44 716 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PABPC1L2AQ5JQF8 200 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 MFSD14CQ5VZR4 134 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ZCCHC12Q6PEW1 402 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 USP17L6PQ6QN14 398 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 WASH2PQ6VEQ5 465 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 RAB44Q7Z6P3 723 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ADGRD2Q7Z7M1 963 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 VASH2Q86V25 355 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 TMC8Q8IU68 726 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SIAH1Q8IUQ4 282 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 NUTM2AQ8IVF1 878 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CCDC103Q8IW40 242 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ADGRF4Q8IZF3 695 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 UNC5BQ8IZJ1 945 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 C12orf45Q8N5I9 185 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 BANPQ8N9N5 519 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 TXNDC5Q8NBS9 432 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 CHST14Q8NCH0 376 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SEMA6DQ8NFY4 1073 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 OR52J3Q8NH60 311 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 SFT2D1Q8WV19 159 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ST8SIA2Q92186 375 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DLG3Q92796 817 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 MAP4K1Q92918 833 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PPWD1Q96BP3 646 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PDLIM5Q96HC4 596 aaKnown RBP5.03□□□□□ -1.6
UBE4A-203ENST00000545354 NSL1Q96IY1 281 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ZNF778Q96MU6 729 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 TEAD3Q99594 435 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 MIPEPQ99797 713 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 MXRA8Q9BRK3 442 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ERVK-6Q9BXR3 956 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 AP5M1Q9H0R1 490 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 MKNK2Q9HBH9 465 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 RNF19AQ9NV58 838 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 PTTG3PQ9NZH4 202 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 ERVK-18Q9QC07 812 aa5.03□□□□□ -1.6
UBE4A-203ENST00000545354 DUX4Q9UBX2 424 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms