RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PPP1R16AQ96I34 528 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 BTN2A3PQ96KV6 586 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 PRICKLE1Q96MT3 831 aaPredicted RBP6.07□□□□□ -1.44
CPSF7-222ENST00000544585 LENG8Q96PV6 779 aaPredicted RBP6.07□□□□□ -1.44
CPSF7-222ENST00000544585 FEM1AQ9BSK4 669 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 B3GNT4Q9C0J1 378 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 MMRN2Q9H8L6 949 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 KCNK9Q9NPC2 374 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 EXOC1Q9NV70 894 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 SLC12A4Q9UP95 1085 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 ZFR2Q9UPR6 939 aaKnown RBP6.07□□□□□ -1.44
CPSF7-222ENST00000544585 RCE1Q9Y256 329 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 PIEZO2Q9H5I5 2752 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 PLXNA2O75051 1894 aa6.07□□□□□ -1.44
CPSF7-222ENST00000544585 TDRD6O60522 2096 aaKnown RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 A8MVJ9 347 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 KCNU1A8MYU2 1149 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 GTPBP1O00178 669 aaKnown RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 O00370 1275 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 KPNA3O00505 521 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 NTN3O00634 580 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 MUSKO15146 869 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 NKX2-8O15522 239 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 KLRC4O43908 158 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 ZFPL1O95159 310 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 YEATS4O95619 227 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 KRT1P04264 644 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 PAEPP09466 180 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 PDGFRAP16234 1089 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 PRLRP16471 622 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 GATA3P23771 443 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 TBXAS1P24557 533 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 CASP1P29466 404 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 GPD2P43304 727 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 ACADSBP45954 432 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 STK19P49842 368 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 BLKP51451 505 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 METAP1P53582 386 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 CLDN2P57739 230 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 RPL15P61313 204 aaKnown RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 SLC20A2Q08357 652 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 CYP2A13Q16696 494 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 DEFB133Q30KQ1 61 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 RABGAP1LQ5R372 815 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 PIP5KL1Q5T9C9 394 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 B3GNTL1Q67FW5 361 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 TCTN3Q6NUS6 607 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 SHC4Q6S5L8 630 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 KLHL24Q6TFL4 600 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 KYAT3Q6YP21 454 aaKnown RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 GCNT7Q6ZNI0 430 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 ERN2Q76MJ5 926 aaKnown RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 CHSY1Q86X52 802 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 SLC22A18ASQ8N1D0 253 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 KIAA0895Q8NCT3 520 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 ZNF548Q8NEK5 533 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 DQX1Q8TE96 717 aaKnown RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 NPIPB3Q92617 1050 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 SEMA4DQ92854 862 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 MYEOVQ96EZ4 313 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 ALG14Q96F25 216 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 PAGE5Q96GU1 130 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 GFM1Q96RP9 751 aaKnown RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 SLC38A3Q99624 504 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 CCDC3Q9BQI4 270 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 INTS2Q9H0H0 1204 aaKnown RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 SYNCQ9H7C4 482 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 SYNPO2LQ9H987 977 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 UPF2Q9HAU5 1272 aaKnown RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 PPP1R14DQ9NXH3 145 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 ALKBH4Q9NXW9 302 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 ANAPC2Q9UJX6 822 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 COQ4Q9Y3A0 265 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 SPTAN1Q13813 2472 aaKnown RBP6.06□□□□□ -1.44
CPSF7-222ENST00000544585 ATMQ13315 3056 aa6.06□□□□□ -1.44
CPSF7-222ENST00000544585 TEX15Q9BXT5 2789 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 TRGV11A0A075B6L2 103 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 A1L4Q6 167 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CLEC18AA5D8T8 446 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 SYNDIG1LA6NDD5 238 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 NPEPPSL1A6NEC2 478 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 LMO7DNF2Z398 122 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 YY2O15391 372 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CLDN11O75508 207 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 SCAF4O95104 1147 aaKnown RBP6.05□□□□□ -1.44
CPSF7-222ENST00000544585 TRUB2O95900 331 aaKnown RBP6.05□□□□□ -1.44
CPSF7-222ENST00000544585 MOCS2O96007 188 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CLEC3BP05452 202 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 FYNP06241 537 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 PDHA1P08559 390 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 TRIM49P0CI25 452 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 TRIM49CP0CI26 452 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 UBL4AP11441 157 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CCKBRP32239 447 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 RGS7P49802 495 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 MXI1P50539 228 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 YPEL5P62699 121 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 YWHAZP63104 245 aaKnown RBP6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CUL2Q13617 745 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 THOC5Q13769 683 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms