RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 EGFL7Q9UHF1 273 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 SNRNP200O75643 2136 aaKnown RBP13.28□□□□□ -0.28
HCFC2-202ENST00000544223 KCNE1BA0A087WTH5 132 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 TCRBV21S2A2A0A5A6 115 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 CHUKO15111 745 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 CATP04040 527 aaKnown RBP13.28□□□□□ -0.28
HCFC2-202ENST00000544223 EFNA1P20827 205 aaPredicted RBP13.28□□□□□ -0.28
HCFC2-202ENST00000544223 PSMB5P28074 263 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 IGFALSP35858 605 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 POLR2JP52435 117 aaKnown RBP13.28□□□□□ -0.28
HCFC2-202ENST00000544223 TBPL1P62380 186 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 STX5Q13190 355 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 AMZ2Q86W34 360 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 BHLHE22Q8NFJ8 381 aaPredicted RBP13.28□□□□□ -0.28
HCFC2-202ENST00000544223 TSSK3Q96PN8 268 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 GABRG3Q99928 467 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 DCLRE1BQ9H816 532 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 RIC8BQ9NVN3 520 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 PNMA8BQ9ULN7 279 aaPredicted RBP13.28□□□□□ -0.28
HCFC2-202ENST00000544223 AK5Q9Y6K8 562 aa13.28□□□□□ -0.28
HCFC2-202ENST00000544223 TDRD6O60522 2096 aaKnown RBP13.27□□□□□ -0.28
HCFC2-202ENST00000544223 TRBV23OR9-2A0A075B6M9 112 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 FXYD1O00168 92 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 SLC22A2O15244 555 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 ENO2P09104 434 aaPredicted RBP13.27□□□□□ -0.29
HCFC2-202ENST00000544223 PXNP49023 591 aaPredicted RBP13.27□□□□□ -0.29
HCFC2-202ENST00000544223 CLCNKAP51800 687 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 GRSF1Q12849 480 aaKnown RBP eCLIP13.27□□□□□ -0.29
HCFC2-202ENST00000544223 TRMT5Q32P41 509 aaKnown RBP13.27□□□□□ -0.29
HCFC2-202ENST00000544223 BCL7AQ4VC05 210 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 ZNF765Q7L2R6 523 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 TMPRSS11BQ86T26 416 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 OR2L2Q8NH16 312 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 FBXL8Q96CD0 374 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 FOPNLQ96NB1 174 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 ZCCHC2Q9C0B9 1178 aaKnown RBP13.27□□□□□ -0.29
HCFC2-202ENST00000544223 OR52A5Q9H2C5 316 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 XKR8Q9H6D3 395 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 NDUFAF1Q9Y375 327 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 WFS1O76024 890 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 STATHP02808 62 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 PCNAP12004 261 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 ADSLP30566 484 aaPredicted RBP13.27□□□□□ -0.29
HCFC2-202ENST00000544223 HNMTP50135 292 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 CDC16Q13042 620 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 FLOT2Q14254 428 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 THEMIS2Q5TEJ8 643 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 OGFOD2Q6N063 350 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 ADAMTSL4Q6UY14 1074 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 LRRC70Q7Z2Q7 622 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 ANKRD46Q86W74 232 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 RASGRP3Q8IV61 690 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 GPR156Q8NFN8 814 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 APOLD1Q96LR9 279 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 PPM1MQ96MI6 270 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 EBF2Q9HAK2 575 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 LRTM1Q9HBL6 345 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 GPSM3Q9Y4H4 160 aa13.27□□□□□ -0.29
HCFC2-202ENST00000544223 MGAT4DA6NG13 374 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 CCDC154A6NI56 674 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 IFRD1O00458 451 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-202ENST00000544223 NME4O00746 187 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 ANKRD28O15084 1053 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 MBTPS2O43462 519 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 AKAP10O43572 662 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 PLRG1O43660 514 aaKnown RBP13.26□□□□□ -0.29
HCFC2-202ENST00000544223 ANPEPP15144 967 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 ACADLP28330 430 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 AP1S2P56377 157 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 KCNK10P57789 538 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 SP140Q13342 867 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 ANKRD26P1Q6NSI1 321 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 RALGPS2Q86X27 583 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-202ENST00000544223 PGBD3Q8N328 593 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 FAM160A2Q8N612 972 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-202ENST00000544223 ENDOVQ8N8Q3 282 aaKnown RBP13.26□□□□□ -0.29
HCFC2-202ENST00000544223 CCL4L1Q8NHW4 92 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 STON2Q8WXE9 905 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 USP7Q93009 1102 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 BRINP2Q9C0B6 783 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 TRPS1Q9UHF7 1281 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 CROTQ9UKG9 612 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 CA14Q9ULX7 337 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 SLCO1B1Q9Y6L6 691 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 EIF3FO00303 357 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-202ENST00000544223 RGS14O43566 566 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 BCKDHAP12694 445 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 NPPBP16860 134 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 ACADVLP49748 655 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 RPS21P63220 83 aaKnown RBP13.26□□□□□ -0.29
HCFC2-202ENST00000544223 CDKL1Q00532 357 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 RCAN2Q14206 197 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 SELPLGQ14242 412 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 FAM174BQ3ZCQ3 159 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 TMEM259Q4ZIN3 620 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 C6orf163Q5TEZ5 329 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 LPCAT4Q643R3 524 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 SPATA19Q7Z5L4 167 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 LRRTM4Q86VH4 590 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 KBTBD2Q8IY47 623 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms