RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 CPPED1Q9BRF8 314 aaPredicted RBP12.24□□□□□ -0.45
SMCR5-201ENST00000543475 NXF2Q9GZY0 626 aaKnown RBP12.24□□□□□ -0.45
SMCR5-201ENST00000543475 RNF167Q9H6Y7 350 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 AGO1Q9UL18 857 aaKnown RBP12.24□□□□□ -0.45
SMCR5-201ENST00000543475 TLR6Q9Y2C9 796 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 OTOFQ9HC10 1997 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 TRBV5-3A0A0A0MS03 114 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 SCO2O43819 266 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 SSX4O60224 188 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 CCNDBP1O95273 360 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 DNTTP04053 509 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 ACVRL1P37023 503 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 GZMMP51124 257 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 CSNK2BP67870 215 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 NPRL3Q12980 569 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 SERINC3Q13530 473 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 PPP2R2DQ66LE6 453 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.24□□□□□ -0.45
SMCR5-201ENST00000543475 ANKRD46Q86W74 232 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 ZNF683Q8IZ20 524 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 IGSF8Q969P0 613 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 DEPDC7Q96QD5 511 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 FARSBQ9NSD9 589 aaKnown RBP12.24□□□□□ -0.45
SMCR5-201ENST00000543475 FBXL12Q9NXK8 326 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 CCDC59Q9P031 241 aaKnown RBP12.24□□□□□ -0.45
SMCR5-201ENST00000543475 SNX6Q9UNH7 406 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 ANGPTL3Q9Y5C1 460 aa12.24□□□□□ -0.45
SMCR5-201ENST00000543475 C2orf81A6NN90 581 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 CENPXA8MT69 81 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 GPR182O15218 404 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 GUCA1CO95843 209 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 FABP3P05413 133 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 HTR3AP46098 478 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 HSPA7P48741 367 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 TTPAP49638 278 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 CRYBB1P53674 252 aaPredicted RBP12.23□□□□□ -0.45
SMCR5-201ENST00000543475 SOWAHCQ53LP3 525 aaPredicted RBP12.23□□□□□ -0.45
SMCR5-201ENST00000543475 ZRANB3Q5FWF4 1079 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 ENTHD1Q8IYW4 607 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 OR10T2Q8NGX3 314 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 HASPINQ8TF76 798 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 APH1BQ8WW43 257 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 LRTM1Q9HBL6 345 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 AMBNQ9NP70 447 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 C14orf119Q9NWQ9 140 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 IQCF5A8MTL0 148 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 EVPLLA8MZ36 301 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 SLC28A1O00337 649 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 ULK1O75385 1050 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 B3GAT3O94766 335 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 MZF1P28698 734 aaPredicted RBP12.23□□□□□ -0.45
SMCR5-201ENST00000543475 OR1E1P30953 314 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 BRCC3P46736 316 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 RACK1P63244 317 aaKnown RBP12.23□□□□□ -0.45
SMCR5-201ENST00000543475 ABHD18Q0P651 414 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 TBCEQ15813 527 aaPredicted RBP12.23□□□□□ -0.45
SMCR5-201ENST00000543475 RAP1GAP2Q684P5 730 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 TTC23LQ6PF05 361 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 SUSD1Q6UWL2 747 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 SLC46A3Q7Z3Q1 461 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 SCN4BQ8IWT1 228 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 PLPP6Q8IY26 295 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 MYDGFQ969H8 173 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 Q96MT0 163 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 CHCHD6Q9BRQ6 235 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 OR51E2Q9H255 320 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 PTPRDP23468 1912 aa12.23□□□□□ -0.45
SMCR5-201ENST00000543475 WNT9AO14904 365 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 SNX4O95219 450 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 FKBP9O95302 570 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 CHRNB1P11230 501 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 MC4RP32245 332 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 S100A3P33764 101 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 GRK5P34947 590 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 SLC15A1P46059 708 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 CAMK2GQ13555 558 aaPredicted RBP12.22□□□□□ -0.45
SMCR5-201ENST00000543475 TAF1AQ15573 450 aaPredicted RBP12.22□□□□□ -0.45
SMCR5-201ENST00000543475 PARP15Q460N3 678 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 FAM171A1Q5VUB5 890 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 FBXL22Q6P050 247 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 AGMOQ6ZNB7 445 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 SPATA2LQ8IUW3 424 aaPredicted RBP12.22□□□□□ -0.45
SMCR5-201ENST00000543475 UBQLNLQ8IYU4 475 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 MDGA1Q8NFP4 955 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 DNAJB8Q8NHS0 232 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 KCNJ9Q92806 393 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 CEP19Q96LK0 163 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 RPRD1AQ96P16 312 aaPredicted RBP12.22□□□□□ -0.45
SMCR5-201ENST00000543475 INPP5KQ9BT40 448 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 KCNH6Q9H252 994 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 NSUN3Q9H649 340 aaKnown RBP12.22□□□□□ -0.45
SMCR5-201ENST00000543475 REEP1Q9H902 201 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 DKK3Q9UBP4 350 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 ZNF490Q9ULM2 529 aaPredicted RBP12.22□□□□□ -0.45
SMCR5-201ENST00000543475 BTBD3Q9Y2F9 522 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 LOC110117498-PIK3R3F6TDL0 507 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 TNFRSF10BO14763 440 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 FFAR2O15552 330 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 TLL1O43897 1013 aa12.22□□□□□ -0.45
SMCR5-201ENST00000543475 TSPAN3O60637 253 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms