RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 PTAR1Q7Z6K3 402 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 TECPR1Q7Z6L1 1165 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 CTAGE6Q86UF2 777 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 IQCHQ86VS3 1027 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 TSPYL5Q86VY4 417 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 CTAGE4Q8IX94 777 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 ABCA7Q8IZY2 2146 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 CEP112Q8N8E3 955 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 TP53I13Q8NBR0 393 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 UHMK1Q8TAS1 419 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 GSDMBQ8TAX9 411 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 BRSK1Q8TDC3 778 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 ASB11Q8WXH4 323 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 AP2M1Q96CW1 435 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 DTD2Q96FN9 168 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 KLF6Q99612 283 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 CDIP1Q9H305 208 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 FAM83DQ9H4H8 585 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 EPS8L2Q9H6S3 715 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 BPIFA1Q9NP55 256 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 MBNL1Q9NR56 388 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 SEMA4GQ9NTN9 838 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 DECR2Q9NUI1 292 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 PCMTD2Q9NV79 361 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 HPF1Q9NWY4 346 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 PRR13Q9NZ81 148 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 BFARQ9NZS9 450 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 ARL5AQ9Y689 179 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 SLCO1B1Q9Y6L6 691 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 DMDP11532 3685 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 NUMA1Q14980 2115 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 FASNP49327 2511 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 THADAQ6YHU6 1953 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 A0A1W2PR77 199 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 EFCAB8A8MWE9 144 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 PATE3B3GLJ2 98 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 CACNB4O00305 520 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 NDC80O14777 642 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 BUD23O43709 281 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 FOXD2O60548 495 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 FMO6PO60774 539 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 PPFIA2O75334 1257 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 TMEM63AO94886 807 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 WNT1P04628 370 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 GM2AP17900 193 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 GRK3P35626 688 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 GRIA1P42261 906 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 GPR1P46091 355 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 NPY2RP49146 381 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 THOP1P52888 689 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 CSE1LP55060 971 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 SESN2P58004 480 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 YPEL5P62699 121 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 IRX4P78413 519 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 DPTQ07507 201 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 BNIP3Q12983 259 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 MTM1Q13496 603 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 KCNJ11Q14654 390 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 POU6F1Q14863 301 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 MYBPC3Q14896 1274 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 TBCEQ15813 527 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 CSRP2Q16527 193 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 AASDHQ4L235 1098 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 ALS2CLQ60I27 953 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 TCEAL6Q6IPX3 200 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 LRRC8BQ6P9F7 803 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 BORAQ6PGQ7 559 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 LAYNQ6UX15 382 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 KYAT3Q6YP21 454 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 RFLNAQ6ZTI6 216 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 ABI3BPQ7Z7G0 1075 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 ZER1Q7Z7L7 766 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 DCP2Q8IU60 420 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 DCLK2Q8N568 766 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 PLA2G15Q8NCC3 412 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 BBOF1Q8ND07 529 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 IL17RDQ8NFM7 739 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 CPT1BQ92523 772 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 TCEAL3Q969E4 200 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 EID2BQ96D98 161 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 BMFQ96LC9 184 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 TRIM51Q9BSJ1 452 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 APOOQ9BUR5 198 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 RIOK2Q9BVS4 552 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 GTPBP2Q9BX10 602 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 SPATA16Q9BXB7 569 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 TRIM31Q9BZY9 425 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 ABCG8Q9H221 673 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 WDR26Q9H7D7 661 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 LIN28AQ9H9Z2 209 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 BRF2Q9HAW0 419 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 SAYSD1Q9NPB0 183 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 FSCN3Q9NQT6 498 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 C5AR2Q9P296 337 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 DUSP13Q9UII6 198 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 SLC5A6Q9Y289 635 aa5.02□□□□□ -1.61
CLIP1-217ENST00000543205 UTP11Q9Y3A2 253 aaKnown RBP5.02□□□□□ -1.61
CLIP1-217ENST00000543205 FANCMQ8IYD8 2048 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms