RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 TNKS2Q9H2K2 1166 aa12.61□□□□□ -0.39
DDX11-223ENST00000542838 TM9SF3Q9HD45 589 aa12.61□□□□□ -0.39
DDX11-223ENST00000542838 CCNB1IP1Q9NPC3 277 aa12.61□□□□□ -0.39
DDX11-223ENST00000542838 ABCB10Q9NRK6 738 aa12.61□□□□□ -0.39
DDX11-223ENST00000542838 PDP1Q9P0J1 537 aaPredicted RBP12.61□□□□□ -0.39
DDX11-223ENST00000542838 KIF17Q9P2E2 1029 aa12.61□□□□□ -0.39
DDX11-223ENST00000542838 RBMX2Q9Y388 322 aaKnown RBP12.61□□□□□ -0.39
DDX11-223ENST00000542838 PLXNA4Q9HCM2 1894 aa12.61□□□□□ -0.39
DDX11-223ENST00000542838 EFCAB9A8MZ26 197 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 DUSP11O75319 330 aaKnown RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 PRAMEF12O95522 483 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 NTRK1P04629 796 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 LCKP06239 509 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 EPB42P16452 691 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 CTPS1P17812 591 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 DGKAP23743 735 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 ALDH7A1P49419 539 aaKnown RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 MVKQ03426 396 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 MAD2L1BPQ15013 274 aaPredicted RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 CPSF6Q16630 551 aaKnown RBP eCLIP12.6□□□□□ -0.39
DDX11-223ENST00000542838 C9orf131Q5VYM1 1079 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 HORMAD1Q86X24 394 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 TSSK3Q96PN8 268 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 NTMT1Q9BV86 223 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 NACA2Q9H009 215 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 CRISPLD1Q9H336 500 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 MAN2B2Q9Y2E5 1009 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 DLGAP4Q9Y2H0 992 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 PCDHB9Q9Y5E1 797 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 MICAL3Q7RTP6 2002 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 OXSR1O95747 527 aaPredicted RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 EPHA2P29317 976 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 DNAJA1P31689 397 aaKnown RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 SLC11A2P49281 568 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 SLC13A2Q13183 592 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 SELENBP1Q13228 472 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 MTA1Q13330 715 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 ZNF177Q13360 481 aaPredicted RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 BCL2A1Q16548 175 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 PLEKHG6Q3KR16 790 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 CERS6Q6ZMG9 384 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 RNF165Q6ZSG1 346 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 AHSA2Q719I0 299 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 C16orf59Q7L2K0 433 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 DENND1CQ8IV53 801 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 CLDN19Q8N6F1 224 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 STARD8Q92502 1023 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 UBE2FQ969M7 185 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 TBC1D20Q96BZ9 403 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 EID2BQ96D98 161 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 ACPTQ9BZG2 426 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 IL1RAPQ9NPH3 570 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 GPRC5BQ9NZH0 403 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 OSGIN1Q9UJX0 560 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 PRSS21Q9Y6M0 314 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 CLDN11O75508 207 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 FPR1P21462 350 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 CA5AP35218 305 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 KRT20P35900 424 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 CLK1P49759 484 aaKnown RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 SGSHP51688 502 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 CLDN8P56748 225 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 DSC1Q08554 894 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 SLC14A1Q13336 389 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 RNF219Q5W0B1 726 aaPredicted RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 MBOAT1Q6ZNC8 495 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 ZNF551Q7Z340 670 aaPredicted RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 GALNT10Q86SR1 603 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 ATG16L2Q8NAA4 619 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 HTRA1Q92743 480 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 USP7Q93009 1102 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 PYCR2Q96C36 320 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 KRT84Q9NSB2 600 aa12.6□□□□□ -0.39
DDX11-223ENST00000542838 NDRG4Q9ULP0 352 aaKnown RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 NUP214P35658 2090 aaPredicted RBP12.6□□□□□ -0.39
DDX11-223ENST00000542838 VWA8A3KMH1 1905 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 ILVBLA1L0T0 632 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 OR2A25A4D2G3 310 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 LRATO95237 230 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 FABP3P05413 133 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 ALPIP09923 528 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 HOXA9P31269 272 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 TGFBR2P37173 567 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 EIF2DP41214 584 aaKnown RBP12.59□□□□□ -0.39
DDX11-223ENST00000542838 ARHGEF7Q14155 803 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 NCEH1Q6PIU2 408 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 TSPYL5Q86VY4 417 aaPredicted RBP12.59□□□□□ -0.39
DDX11-223ENST00000542838 DCSTAMPQ9H295 470 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 EPS8L2Q9H6S3 715 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 SLCO3A1Q9UIG8 710 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 ATP11BQ9Y2G3 1177 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 SAMHD1Q9Y3Z3 626 aaKnown RBP12.59□□□□□ -0.39
DDX11-223ENST00000542838 CLDN24A6NM45 220 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 EVPLLA8MZ36 301 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 RFXANKO14593 260 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 PRAMEF1O95521 474 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 PDYNP01213 254 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 KRT6AP02538 564 aa12.59□□□□□ -0.39
DDX11-223ENST00000542838 KRT6BP04259 564 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms