RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CHRNB2P17787 502 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 WT1P19544 449 aaPredicted RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 UGT1A1P22309 533 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 BDKRB2P30411 391 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 HSD17B3P37058 310 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 PLA2G5P39877 138 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 NPBWR1P48145 328 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF132P52740 706 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 ARFIP1P53367 373 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 MTCP1P56278 107 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 CD81P60033 236 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 GALK2Q01415 458 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 LRRC74AQ0VAA2 488 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 TROAPQ12815 778 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 PLA2G7Q13093 441 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 CUL3Q13618 768 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 CCDC40Q4G0X9 1142 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 PPP6R3Q5H9R7 873 aaPredicted RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 PIK3CD-AS1Q5SR53 167 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 TEX35Q5T0J7 233 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 AKNAD1Q5T1N1 836 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 ASPHD1Q5U4P2 390 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 LRRC38Q5VT99 294 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 KCTD11Q693B1 232 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 SUMO4Q6EEV6 95 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 PSRC1Q6PGN9 363 aaPredicted RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 DLK2Q6UY11 383 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF793Q6ZN11 406 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 PALB2Q86YC2 1186 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 KLHDC8AQ8IYD2 350 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 FBXW8Q8N3Y1 598 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC5A8Q8N695 610 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 AMER3Q8N944 861 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 CCNYQ8ND76 341 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 TMEM163Q8TC26 289 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 TRIB2Q92519 343 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 MRPL38Q96DV4 380 aaKnown RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 ALG14Q96F25 216 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 DTD2Q96FN9 168 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 CDKN2AIPNLQ96HQ2 116 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 NSMCE2Q96MF7 247 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF582Q96NG8 517 aaPredicted RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 TXN2Q99757 166 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 SLX1AQ9BQ83 275 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 WDR77Q9BQA1 342 aaPredicted RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 LMF2Q9BU23 707 aaKnown RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 CLK4Q9HAZ1 481 aaKnown RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 CDH20Q9HBT6 801 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 NGBQ9NPG2 151 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC17A6Q9P2U8 582 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 TRIM10Q9UDY6 481 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 FBXL2Q9UKC9 423 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 EXOC6BQ9Y2D4 811 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 HBS1LQ9Y450 684 aaKnown RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 MYOM2P54296 1465 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 DISP2A7MBM2 1401 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 LRPPRCP42704 1394 aaKnown RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 MTUS2Q5JR59 1369 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 PIK3R4Q99570 1358 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 EIF2AK4Q9P2K8 1649 aaKnown RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 VIRMAQ69YN4 1812 aaKnown RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 KIF7Q2M1P5 1343 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 PRSS51A0A1B0GVH4 220 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 FAM149AA5PLN7 773 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 CFAP73A6NFT4 308 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 NEMP2A6NFY4 417 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 A6NNC1 897 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 ZIC3O60481 467 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 PRDM1O75626 825 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 RAD51DO75771 328 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 DIRAS3O95661 229 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 IGHV2-70P01814 119 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 ANKRD34CP0C6C1 535 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 TPBGLP0DKB5 382 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 CHRNB1P11230 501 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 KRT13P13646 458 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 NCF1P14598 390 aaPredicted RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 RPS2P15880 293 aaKnown RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 GPD1P21695 349 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 ADSSP30520 456 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 MAGEA4P43358 317 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 MAGEB1P43366 347 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 IER3P46695 156 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 IFNAR2P48551 515 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 HNMTP50135 292 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 HTR6P50406 440 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 SMSP52788 366 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 CACNA2D1P54289 1103 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 GCNT1Q02742 428 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 EGR4Q05215 589 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 KARSQ15046 597 aaKnown RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 EFNB3Q15768 340 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 CES4AQ5XG92 561 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 C18orf63Q68DL7 685 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 FAM109BQ6ICB4 259 aaPredicted RBP3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 SLC25A24Q6NUK1 477 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 RGS9BPQ6ZS82 235 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 ATG9AQ7Z3C6 839 aa3.77□□□□□ -1.81
SFSWAP-211ENST00000542813 TMEM110Q86TL2 294 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms