RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 MYO9BQ13459 2157 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 SCN9AQ15858 1988 aa8.02□□□□□ -1.13
PRKAB1-207ENST00000542698 A0A1W2PQ67 120 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 PRR23D1E9PI22 279 aaPredicted RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 H0Y858 1186 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 BOLA2-SMG1P6H3BVE0 249 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 TSC22D2O75157 780 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ALDOCP09972 364 aaKnown RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 SPATA31D3P0C874 917 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 PRR23D2P0DMB1 279 aaPredicted RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 PTX3P26022 381 aaPredicted RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 GPR1P46091 355 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 RFX3P48380 749 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ERVPABLB-1P60509 514 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 VBP1P61758 197 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 SEMA3BQ13214 749 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 RCAN2Q14206 197 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 DSC3Q14574 896 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ABRAXAS2Q15018 415 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 CES4AQ5XG92 561 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ATG9BQ674R7 924 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 DEF8Q6ZN54 512 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 FAM43BQ6ZT52 329 aaPredicted RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 SPATA31D4Q6ZUB0 917 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 CARM1Q86X55 608 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 CAMKK1Q8N5S9 505 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 HTATIP2Q9BUP3 242 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 FUNDC2Q9BWH2 189 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 KRCC1Q9NPI7 259 aaPredicted RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ZDHHC3Q9NYG2 299 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 PIPSLA2A3N6 862 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 MTMR11A4FU01 709 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 H3BMQ9 156 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ATG13O75143 517 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 INMTO95050 263 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 SELPP16109 830 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 TNNI3P19429 210 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 CSKP41240 450 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 HNMTP50135 292 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 BMXP51813 675 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 NDUFA5Q16718 116 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 SLC36A3Q495N2 470 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 RFTN2Q52LD8 501 aaPredicted RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 CEP78Q5JTW2 689 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 MZT2BQ6NZ67 158 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 MED27Q6P2C8 311 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 NEK5Q6P3R8 708 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 KLHL17Q6TDP4 642 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 NANOGNBQ7Z5D8 188 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 SERINC5Q86VE9 423 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ARMC8Q8IUR7 673 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 DTWD1Q8N5C7 304 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ZNF614Q8N883 585 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 PAWRQ96IZ0 340 aaKnown RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 MAELQ96JY0 434 aaKnown RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 COG8Q96MW5 612 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ZNF641Q96N77 438 aaPredicted RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 SPATA5L1Q9BVQ7 753 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 FNDC11Q9BVV2 318 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 GULP1Q9UBP9 304 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 FZD4Q9ULV1 537 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ZNF510Q9Y2H8 683 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 GPR45Q9Y5Y3 372 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 NHSQ6T4R5 1651 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 PCDH8O95206 1070 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 HPRP00739 348 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 ELFN1P0C7U0 828 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 PRDX3P30048 256 aaKnown RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 HTR6P50406 440 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 AP1S2P56377 157 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 DNASE1L3Q13609 305 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 COLEC12Q5KU26 742 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 RAET1GQ6H3X3 334 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 RNF19BQ6ZMZ0 732 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 USP43Q70EL4 1123 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 YAF2Q8IY57 180 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 CDK20Q8IZL9 346 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 OR10G2Q8NGC3 310 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 CNIH3Q8TBE1 160 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 XAGE5Q8WWM1 108 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 NPLQ9BXD5 320 aaPredicted RBP8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 TPT1P8Q9HAU6 139 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 TM9SF3Q9HD45 589 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 SEC14L3Q9UDX4 400 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 TMED5Q9Y3A6 229 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 CDK5RAP2Q96SN8 1893 aa8.01□□□□□ -1.13
PRKAB1-207ENST00000542698 UNCXA6NJT0 531 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 AGRPO00253 132 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 HAT1O14929 419 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 MPZL2O60487 215 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 CYP7B1O75881 506 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 GADD45GO95257 159 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 CHRNA1P02708 482 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 BCKDHAP12694 445 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 ARSAP15289 507 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 GSTM2P28161 218 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 GRIA2P42262 883 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 DPP6P42658 865 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 CASP9P55211 416 aa8□□□□□ -1.13
PRKAB1-207ENST00000542698 TUBA1BP68363 451 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms