RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 METTL2BQ6P1Q9 378 aaKnown RBP22.36■■□□□ 1.17
HOMER3-205ENST00000542541 ADGRF3Q8IZF5 1079 aa22.36■■□□□ 1.17
HOMER3-205ENST00000542541 PTGR2Q8N8N7 351 aaPredicted RBP22.36■■□□□ 1.17
HOMER3-205ENST00000542541 LINC01555Q8NAE3 123 aa22.36■■□□□ 1.17
HOMER3-205ENST00000542541 OR56A3Q8NH54 315 aa22.36■■□□□ 1.17
HOMER3-205ENST00000542541 MED8Q96G25 268 aa22.36■■□□□ 1.17
HOMER3-205ENST00000542541 PCBD2Q9H0N5 130 aa22.36■■□□□ 1.17
HOMER3-205ENST00000542541 CCDC177Q9NQR7 707 aaPredicted RBP22.36■■□□□ 1.17
HOMER3-205ENST00000542541 PIPSLA2A3N6 862 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 C2orf74A8MZ97 194 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 BTN3A3O00478 584 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 DLX3O60479 287 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 STK16O75716 305 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 TYRP1P17643 537 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 CSRP1P21291 193 aaKnown RBP22.35■■□□□ 1.17
HOMER3-205ENST00000542541 ETV4P43268 484 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 CAPZBP47756 277 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 ASPHQ12797 758 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 ILKQ13418 452 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 TSTA3Q13630 321 aaPredicted RBP22.35■■□□□ 1.17
HOMER3-205ENST00000542541 MPP2Q14168 576 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 TRIP6Q15654 476 aaKnown RBP22.35■■□□□ 1.17
HOMER3-205ENST00000542541 PTCHD3Q3KNS1 767 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 C2orf73Q8N5S3 287 aaPredicted RBP22.35■■□□□ 1.17
HOMER3-205ENST00000542541 ANKRD42Q8N9B4 389 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 SREK1Q8WXA9 508 aaKnown RBP22.35■■□□□ 1.17
HOMER3-205ENST00000542541 PHF21BQ96EK2 531 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 A8MT66 165 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 TAPBPO15533 448 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 POLR2CP19387 275 aaPredicted RBP22.35■■□□□ 1.17
HOMER3-205ENST00000542541 PLA2G5P39877 138 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 PPP2R2AP63151 447 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 SQSTM1Q13501 440 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 FASTKQ14296 549 aaKnown RBP22.35■■□□□ 1.17
HOMER3-205ENST00000542541 CLPPQ16740 277 aaPredicted RBP22.35■■□□□ 1.17
HOMER3-205ENST00000542541 AMZ1Q400G9 498 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 THEMIS2Q5TEJ8 643 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 HHATQ5VTY9 493 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 GLRX5Q86SX6 157 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 LRRC56Q8IYG6 542 aaPredicted RBP22.35■■□□□ 1.17
HOMER3-205ENST00000542541 PPFIBP2Q8ND30 876 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 WDR48Q8TAF3 677 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 UBTD2Q8WUN7 234 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 NRTNQ99748 197 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 MIPEPQ99797 713 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 CD244Q9BZW8 370 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 RAB33BQ9H082 229 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 ABCG4Q9H172 646 aa22.35■■□□□ 1.17
HOMER3-205ENST00000542541 PTPRZ1P23471 2315 aaPredicted RBP22.34■■□□□ 1.17
HOMER3-205ENST00000542541 ISM1B1AKI9 464 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 CD1CP29017 333 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 OAS2P29728 719 aaKnown RBP22.34■■□□□ 1.17
HOMER3-205ENST00000542541 HSPA7P48741 367 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 ACADVLP49748 655 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 PRKAA2P54646 552 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 TBPL1P62380 186 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 PCBP2Q15366 365 aaKnown RBP eCLIP22.34■■□□□ 1.17
HOMER3-205ENST00000542541 PLXDC1Q8IUK5 500 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 NCSTNQ92542 709 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 RSC1A1Q92681 617 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 DPYSL5Q9BPU6 564 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 SGPP1Q9BX95 441 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 ZMYND15Q9H091 742 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 LRRN3Q9H3W5 708 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 OXSMQ9NWU1 459 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 OGFRQ9NZT2 677 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 EPHA6Q9UF33 1036 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 PCDHB11Q9Y5F2 797 aa22.34■■□□□ 1.17
HOMER3-205ENST00000542541 CFAP54Q96N23 3096 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 GSAPA4D1B5 854 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 SLC30A4O14863 429 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 IMPDH1P20839 514 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 SLC6A12P48065 614 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 E2F1Q01094 437 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 ZXDCQ2QGD7 858 aaPredicted RBP22.33■■□□□ 1.17
HOMER3-205ENST00000542541 SUSD1Q6UWL2 747 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 TAX1BP1Q86VP1 789 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 KLHDC8AQ8IYD2 350 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 DEFB124Q8NES8 71 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 PYCR2Q96C36 320 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 ZDHHC12Q96GR4 267 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 TMEM79Q9BSE2 394 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 HAUS8Q9BT25 410 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 TWSG1Q9GZX9 223 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 ACTR10Q9NZ32 417 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 OPTCQ9UBM4 332 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 CDV3Q9UKY7 258 aaKnown RBP22.33■■□□□ 1.17
HOMER3-205ENST00000542541 PCDHGA1Q9Y5H4 931 aa22.33■■□□□ 1.17
HOMER3-205ENST00000542541 PIEZO1Q92508 2521 aa22.33■■□□□ 1.16
HOMER3-205ENST00000542541 BIRC5O15392 142 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 WDR47O94967 919 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 FKBP9O95302 570 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 RPLP0P05388 317 aaKnown RBP22.32■■□□□ 1.16
HOMER3-205ENST00000542541 DHRS4L1P0CG22 281 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 NR1D1P20393 614 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 SDHBP21912 280 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 SERPINB4P48594 390 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 DNAJB13P59910 316 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 NAA20P61599 178 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 HERVK_113P63132 956 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms