RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TCEAL3Q969E4 200 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 RAB7BQ96AH8 199 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 BIRC7Q96CA5 298 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ARHGEF26Q96DR7 871 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF503Q96F45 646 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 FEM1CQ96JP0 617 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 NUP85Q9BW27 656 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 RAB6CQ9H0N0 254 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 THAP2Q9H0W7 228 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 PREBQ9HCU5 417 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 CD93Q9NPY3 652 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ABHD10Q9NUJ1 306 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 HAUS2Q9NVX0 235 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 LRIT1Q9P2V4 623 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 UBA2Q9UBT2 640 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ANAPC7Q9UJX3 599 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 PTPRZ1P23471 2315 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 ATXN2Q99700 1313 aaKnown RBP5.38□□□□□ -1.55
CPSF7-220ENST00000541963 MYO15AQ9UKN7 3530 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 DOCK4Q8N1I0 1966 aa5.38□□□□□ -1.55
CPSF7-220ENST00000541963 USP34Q70CQ2 3546 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 ZAR1LA6NP61 321 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 PRAMEF26H0Y7S4 382 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 K7ERQ8 282 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 M0R3H8 397 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 CDX4O14627 284 aaPredicted RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 VILLO15195 856 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 YKT6O15498 198 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 CTIFO43310 598 aaKnown RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SMAD6O43541 496 aaKnown RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 LRCH4O75427 683 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 PALMO75781 387 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 WDR47O94967 919 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 KCNK5O95279 499 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 KRT7P08729 469 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF883P0CG24 379 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 NR2F6P10588 404 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 NDUFB7P17568 137 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 ERCC2P18074 760 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 CSRP1P21291 193 aaKnown RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 NFKBIAP25963 317 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 CD38P28907 300 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SERPINB6P35237 376 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 DRD3P35462 400 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 ARHGAP25P42331 645 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 CSNK1EP49674 416 aaKnown RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SUOXP51687 545 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 CCNHP51946 323 aaPredicted RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 ADPRHP54922 357 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 RHOAP61586 193 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 RPS21P63220 83 aaKnown RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 CNTN1Q12860 1018 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 OVGP1Q12889 678 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SEMA3BQ13214 749 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SGCGQ13326 291 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 RFTN1Q14699 578 aaPredicted RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 PDK2Q15119 407 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SPA17Q15506 151 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 DPYSL2Q16555 572 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 MYLK3Q32MK0 819 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SETMARQ53H47 684 aaPredicted RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF805Q5CZA5 627 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF569Q5MCW4 686 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 CFAP58Q5T655 872 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 JMJD6Q6NYC1 403 aaPredicted RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 TMCO3Q6UWJ1 677 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 GDPD4Q6W3E5 623 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 Q6ZNX1 250 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 DPY19L3Q6ZPD9 716 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 RHOUQ7L0Q8 258 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 PARS2Q7L3T8 475 aaKnown RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 MAVSQ7Z434 540 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 MRGPREQ86SM8 312 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 TRIM69Q86WT6 500 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 DNAAF5Q86Y56 855 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 LRRC49Q8IUZ0 686 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SLC44A2Q8IWA5 706 aaPredicted RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 MINDY1Q8N5J2 469 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 AADATQ8N5Z0 425 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SIRT6Q8N6T7 355 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 KCTD6Q8NC69 237 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 OR2AP1Q8NGE2 309 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF564Q8TBZ8 553 aaPredicted RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 HCAR2Q8TDS4 363 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 ANKRD7Q92527 254 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 HSPH1Q92598 858 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 FAM131CQ96AQ9 280 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 HMCESQ96FZ2 354 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SERAC1Q96JX3 654 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 PBKQ96KB5 322 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 GDAP1L1Q96MZ0 367 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SNRNP25Q9BV90 132 aaKnown RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 MAK16Q9BXY0 300 aaKnown RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 ZDHHC6Q9H6R6 413 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 GAREM1Q9H706 876 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 NHEJ1Q9H9Q4 299 aaPredicted RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 TM9SF3Q9HD45 589 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 RXFP3Q9NSD7 469 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 GPATCH2LQ9NWQ4 482 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms