RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ENOPH1Q9UHY7 261 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 MAPRE3Q9UPY8 281 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 SCML2Q9UQR0 700 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 TESMINQ9Y4I5 508 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 OAS3Q9Y6K5 1087 aaKnown RBP10.17□□□□□ -0.78
CHFR-219ENST00000541341 CFAP47Q6ZTR5 3102 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 WDFY3Q8IZQ1 3526 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 ANKRD36A6QL64 1941 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 TMEM233B4DJY2 109 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 FAM47E-STBD1D6RA91 191 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 LOC110117498-PIK3R3F6TDL0 507 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 FXYD1O00168 92 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 PLK4O00444 970 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 SCAMP3O14828 347 aaKnown RBP10.16□□□□□ -0.78
CHFR-219ENST00000541341 PIP5K1BO14986 540 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 ADAM23O75077 832 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 RPP40O75818 363 aaKnown RBP10.16□□□□□ -0.78
CHFR-219ENST00000541341 PRKD3O94806 890 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 LRIG2O94898 1065 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 CDK14O94921 469 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 MED26O95402 600 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 SNAP29O95721 258 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 FGF1P05230 155 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 IL6P05231 212 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 CD1DP15813 335 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 GGT1P19440 569 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 PTX3P26022 381 aaPredicted RBP10.16□□□□□ -0.78
CHFR-219ENST00000541341 HPCAL1P37235 193 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 PPP3CCP48454 512 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 ABRQ12979 859 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 RUNX3Q13761 415 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 SPCS2Q15005 226 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 PHKG1Q16816 387 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 SYT6Q5T7P8 510 aaPredicted RBP10.16□□□□□ -0.78
CHFR-219ENST00000541341 ZNF691Q5VV52 312 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 ATG9BQ674R7 924 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 XAF1Q6GPH4 301 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 DENND5AQ6IQ26 1287 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 MAMSTRQ6ZN01 415 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 TMEM150AQ86TG1 271 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 RETREG3Q86VR2 466 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 WDR5BQ86VZ2 330 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 HORMAD1Q86X24 394 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 ZFAND4Q86XD8 727 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 DENND6AQ8IWF6 608 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 CMTM8Q8IZV2 173 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 PAF1Q8N7H5 531 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 PTGR2Q8N8N7 351 aaPredicted RBP10.16□□□□□ -0.78
CHFR-219ENST00000541341 BPIFB6Q8NFQ5 453 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 OR13J1Q8NGT2 312 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 GRPEL2Q8TAA5 225 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 SETD6Q8TBK2 473 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 CLEC4CQ8WTT0 213 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 FBLIM1Q8WUP2 373 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 PIK3R3Q92569 461 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 TMBIM1Q969X1 311 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 PHF21BQ96EK2 531 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 REXO5Q96IC2 774 aaKnown RBP10.16□□□□□ -0.78
CHFR-219ENST00000541341 SLC22A12Q96S37 553 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 SLC30A3Q99726 388 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 CEP41Q9BYV8 373 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 RACGAP1Q9H0H5 632 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 KAT8Q9H7Z6 458 aaKnown RBP10.16□□□□□ -0.78
CHFR-219ENST00000541341 TMEM165Q9HC07 324 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 CYP4F12Q9HCS2 524 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 ATP13A1Q9HD20 1204 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 OSER1Q9NX31 292 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 UXTQ9UBK9 157 aaPredicted RBP10.16□□□□□ -0.78
CHFR-219ENST00000541341 EGFL7Q9UHF1 273 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 RNF112Q9ULX5 631 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 SATB2Q9UPW6 733 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 EIF3LQ9Y262 564 aaKnown RBP10.16□□□□□ -0.78
CHFR-219ENST00000541341 GRIP1Q9Y3R0 1128 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 PEX16Q9Y5Y5 336 aa10.16□□□□□ -0.78
CHFR-219ENST00000541341 SHROOM3Q8TF72 1996 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 LOC100130705A0A1B0GUX0 176 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 MROH6A6NGR9 719 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 FAM25AB3EWG3 89 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 FAM25CB3EWG5 89 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 FAM25GB3EWG6 89 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 F5H423 210 aaPredicted RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 DFFAO00273 331 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 DYRK3O43781 588 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 KLK8O60259 260 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 TPST1O60507 370 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 DPM1O60762 260 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 NADKO95544 446 aaPredicted RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 FGF19O95750 216 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 S1PR4O95977 384 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 CST1P01037 141 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 S100BP04271 92 aaPredicted RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 ALDOCP09972 364 aaKnown RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 GSTT2P0CG29 244 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 GSTT2BP0CG30 244 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 TRAPPC2P0DI81 140 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 TRAPPC2BP0DI82 140 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 NELFEP18615 380 aaKnown RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 CAPN3P20807 821 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 YWHAQP27348 245 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 OPRL1P41146 370 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms