RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-210	ENST00000540975	SEPHS2	Q99611	448 aa		5.21	□□□□□ -1.58
YBX3-210	ENST00000540975	CCDC106	Q9BWC9	280 aa		5.21	□□□□□ -1.58
YBX3-210	ENST00000540975	CDK19	Q9BWU1	502 aa		5.21	□□□□□ -1.58
YBX3-210	ENST00000540975	FGFBP2	Q9BYJ0	223 aa		5.21	□□□□□ -1.58
YBX3-210	ENST00000540975	ERAP1	Q9NZ08	941 aa		5.21	□□□□□ -1.58
YBX3-210	ENST00000540975	ABT1	Q9ULW3	272 aa	Known RBP	5.21	□□□□□ -1.58
YBX3-210	ENST00000540975	WDR37	Q9Y2I8	494 aa		5.21	□□□□□ -1.58
YBX3-210	ENST00000540975	MMP24	Q9Y5R2	645 aa		5.21	□□□□□ -1.58
YBX3-210	ENST00000540975	CLSPN	Q9HAW4	1339 aa		5.21	□□□□□ -1.58
YBX3-210	ENST00000540975	CCDC180	Q9P1Z9	1646 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975		A0A1W2PPQ1	181 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	NEMP2	A6NFY4	417 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	C2orf81	A6NN90	581 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	ERI2	A8K979	691 aa	Known RBP	5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	CRLF1	O75462	422 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	DDHD2	O94830	711 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	MOCS3	O95396	460 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	NR2F1	P10589	423 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	MPZ	P25189	248 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	MTHFR	P42898	656 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	GSDMD	P57764	484 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	GCNT1	Q02742	428 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	UGP2	Q16851	508 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	ZNF613	Q6PF04	617 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	TRIM65	Q6PJ69	517 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	TMED8	Q6PL24	325 aa	Predicted RBP	5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	ARHGAP22	Q7Z5H3	698 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	HOGA1	Q86XE5	327 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	ATL1	Q8WXF7	558 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	ATOH8	Q96SQ7	321 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	IWS1	Q96ST2	819 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	GPR88	Q9GZN0	384 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	TRPV4	Q9HBA0	871 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	MYNN	Q9NPC7	610 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975	EPHA6	Q9UF33	1036 aa		5.2	□□□□□ -1.58
YBX3-210	ENST00000540975		K7ENM7	598 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	DUS4L	O95620	317 aa	Known RBP	5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	ABCB1	P08183	1280 aa	Predicted RBP	5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	LPAL2	Q16609	132 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	C6orf163	Q5TEZ5	329 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	MFSD12	Q6NUT3	480 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	FAM20A	Q96MK3	541 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	VGLL1	Q99990	258 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	APOL6	Q9BWW8	343 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	OR6C2	Q9NZP2	312 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	PAK5	Q9P286	719 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	IL17B	Q9UHF5	180 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	STUB1	Q9UNE7	303 aa		5.19	□□□□□ -1.58
YBX3-210	ENST00000540975	IGKV3D-20	A0A0C4DH25	116 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975		A0A1W2PPM1	405 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	TCRBV21S2A2	A0A5A6	115 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975		E9PQ18	207 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	GLRA3	O75311	464 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	CDK2AP2	O75956	126 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	STARD3NL	O95772	234 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	LEPR	P48357	1165 aa	Known RBP	5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	MAPK12	P53778	367 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	TNIP1	Q15025	636 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	RALBP1	Q15311	655 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	SLC25A47	Q6Q0C1	308 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	TMEM207	Q6UWW9	146 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	NUP54	Q7Z3B4	507 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	GTSCR1	Q86UQ5	136 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	OR10G8	Q8NGN5	311 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	ANKRD9	Q96BM1	317 aa	Predicted RBP	5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	C10orf90	Q96M02	699 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	CABLES2	Q9BTV7	478 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	NOL11	Q9H8H0	719 aa	Known RBP	5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	ANKZF1	Q9H8Y5	726 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	FAM207A	Q9NSI2	230 aa	Predicted RBP	5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	MORF4L1	Q9UBU8	362 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	TNN	Q9UQP3	1299 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	TMED3	Q9Y3Q3	217 aa		5.18	□□□□□ -1.58
YBX3-210	ENST00000540975	ZNF195	O14628	629 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	CLDN1	O95832	211 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	TRUB2	O95900	331 aa	Known RBP	5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	HAPLN1	P10915	354 aa	Predicted RBP	5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	CSTF2	P33240	577 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	CCR10	P46092	362 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	DRP2	Q13474	957 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	IL11RA	Q14626	422 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	HLA-B	Q31612	363 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	SLC35D3	Q5M8T2	416 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	LCN1P1	Q5VSP4	162 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	PRR27	Q6MZM9	219 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	METTL7B	Q6UX53	244 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	CAMKMT	Q7Z624	323 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	OR13C3	Q8NGS6	347 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	TEKT4	Q8WW24	435 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	PIGB	Q92521	554 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	THOC1	Q96FV9	657 aa	Known RBP	5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	C18orf12	Q96KH6	178 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	AGAP3	Q96P47	875 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	TRIM51	Q9BSJ1	452 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	PPAN	Q9NQ55	473 aa	Known RBP	5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	SLC24A2	Q9UI40	661 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	ANAPC2	Q9UJX6	822 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	PPP2R2C	Q9Y2T4	447 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	ANGPTL3	Q9Y5C1	460 aa		5.17	□□□□□ -1.58
YBX3-210	ENST00000540975	COL2A1	P02458	1487 aa	Predicted RBP	5.17	□□□□□ -1.58

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