RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CHD6Q8TD26 2715 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 SNRNP200O75643 2136 aaKnown RBP16.27■□□□□ 0.2
CD9-209ENST00000540891 CXorf49A8MYA2 514 aaPredicted RBP16.27■□□□□ 0.2
CD9-209ENST00000540891 TMEM150CB9EJG8 249 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 SCRG1O75711 98 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 TSPAN12O95859 305 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 CATP04040 527 aaKnown RBP16.27■□□□□ 0.2
CD9-209ENST00000540891 CTSBP07858 339 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 FDXRP22570 491 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 F8A1P23610 371 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 PSMB5P28074 263 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 OAS2P29728 719 aaKnown RBP16.27■□□□□ 0.2
CD9-209ENST00000540891 SKIV2L2P42285 1042 aaKnown RBP16.27■□□□□ 0.2
CD9-209ENST00000540891 GPX6P59796 221 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 YBX1P67809 324 aaKnown RBP16.27■□□□□ 0.2
CD9-209ENST00000540891 DEFB110Q30KQ9 67 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 FCRL6Q6DN72 434 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 PCSK4Q6UW60 755 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 SLC26A11Q86WA9 606 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 ZC3HC1Q86WB0 502 aaKnown RBP16.27■□□□□ 0.2
CD9-209ENST00000540891 DNAJC22Q8N4W6 341 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 GPATCH11Q8N954 259 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 OR2A1Q8NGT9 310 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 EEF1AKMT1Q8WVE0 214 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 BBC3Q96PG8 261 aaPredicted RBP16.27■□□□□ 0.2
CD9-209ENST00000540891 FAM114A2Q9NRY5 505 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 IL17BQ9UHF5 180 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 ADAMTS6Q9UKP5 1117 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 CORO1CQ9ULV4 474 aaPredicted RBP16.27■□□□□ 0.2
CD9-209ENST00000540891 VWA7Q9Y334 891 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 ZFYVE26Q68DK2 2539 aa16.27■□□□□ 0.2
CD9-209ENST00000540891 TCRBV9S1A1TA0A576 114 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 CPNE3O75131 537 aaKnown RBP16.26■□□□□ 0.19
CD9-209ENST00000540891 GPS2Q13227 327 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 SF1Q15637 639 aaKnown RBP16.26■□□□□ 0.19
CD9-209ENST00000540891 FAM45BPQ6NSW5 357 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 STRA8Q7Z7C7 330 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 TMEM126BQ8IUX1 230 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 PALM2Q8IXS6 379 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 LRRC56Q8IYG6 542 aaPredicted RBP16.26■□□□□ 0.19
CD9-209ENST00000540891 RAB42Q8N4Z0 105 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 FAM45AQ8TCE6 357 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 TTC9Q92623 222 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 SLC12A9Q9BXP2 914 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 GPN2Q9H9Y4 310 aaPredicted RBP16.26■□□□□ 0.19
CD9-209ENST00000540891 FANCEQ9HB96 536 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 LHX9Q9NQ69 397 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 DMGDHQ9UI17 866 aaKnown RBP16.26■□□□□ 0.19
CD9-209ENST00000540891 CROTQ9UKG9 612 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 PCDHB3Q9Y5E6 796 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 MGAQ8IWI9 3026 aa16.26■□□□□ 0.19
CD9-209ENST00000540891 MAP3K7O43318 606 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 SLC16A8O95907 504 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 MT-ND3P03897 115 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 GRIA3P42263 894 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 PNLIPRP1P54315 467 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 CYP4F2P78329 520 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 GUCY2DQ02846 1103 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 ARHGAP19Q14CB8 494 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 LRRC8EQ6NSJ5 796 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 SUSD1Q6UWL2 747 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 TMEM207Q6UWW9 146 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 UBE2R2Q712K3 238 aaPredicted RBP16.25■□□□□ 0.19
CD9-209ENST00000540891 CYS1Q717R9 158 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 CCDC25Q86WR0 208 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 OR2L3Q8NG85 312 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 KIF18AQ8NI77 898 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 ZNF480Q8WV37 535 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 LINGO1Q96FE5 620 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 SLC45A3Q96JT2 553 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 LRFN5Q96NI6 719 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 RUFY1Q96T51 708 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 MIPEPQ99797 713 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 LRRC4CQ9HCJ2 640 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.25■□□□□ 0.19
CD9-209ENST00000540891 PADI1Q9ULC6 663 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 KLK4Q9Y5K2 254 aa16.25■□□□□ 0.19
CD9-209ENST00000540891 MRPS18BQ9Y676 258 aaKnown RBP16.25■□□□□ 0.19
CD9-209ENST00000540891 FAM208BQ5VWN6 2430 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 FAM95CA0A1B0GW59 222 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 CTAGE15A4D2H0 777 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 FAM159BA6NKW6 160 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 E7ENX8 843 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 ZBTB14O43829 449 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 NRP2O60462 931 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 FKBP9O95302 570 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 SYF2O95926 243 aaKnown RBP16.24■□□□□ 0.19
CD9-209ENST00000540891 CTAGE8P0CG41 777 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 IMPA1P29218 277 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 RORAP35398 523 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 DLSTP36957 453 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 MAGEA4P43358 317 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 RGS4P49798 205 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 ITGA1P56199 1179 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 TAS2R39P59534 338 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 TAP2Q03519 686 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 PDAP1Q13442 181 aaKnown RBP16.24■□□□□ 0.19
CD9-209ENST00000540891 SOWAHCQ53LP3 525 aaPredicted RBP16.24■□□□□ 0.19
CD9-209ENST00000540891 LCN10Q6JVE6 187 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 FAM199XQ6PEV8 388 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms