RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 KRTAP21-3Q3LHN1 58 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 ANKRD20A2Q5SQ80 823 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 ANKRD20A1Q5TYW2 823 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 ANKRD20A3Q5VUR7 823 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 ATG9BQ674R7 924 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 KAZNQ674X7 775 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 FAM180AQ6UWF9 173 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 TTLL10Q6ZVT0 673 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 GDF7Q7Z4P5 450 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 PARP9Q8IXQ6 854 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 RCOR2Q8IZ40 523 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 ZNF808Q8N4W9 903 aaPredicted RBP6.99□□□□□ -1.29
YBX3-209ENST00000540747 OR8K1Q8NGG5 319 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 KRT35Q92764 455 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 N4BP2L2Q92802 583 aaPredicted RBP6.99□□□□□ -1.29
YBX3-209ENST00000540747 CCDC120Q96HB5 630 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 CDKN2AIPNLQ96HQ2 116 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 THOC3Q96J01 351 aaKnown RBP6.99□□□□□ -1.29
YBX3-209ENST00000540747 CNDP1Q96KN2 507 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 SPATA13Q96N96 652 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 TBL1YQ9BQ87 522 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 KCNF1Q9H3M0 494 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 EPS8L2Q9H6S3 715 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 CUTCQ9NTM9 273 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 IFNKQ9P0W0 207 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 ABI3Q9P2A4 366 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 PLAGL1Q9UM63 463 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 ASF1AQ9Y294 204 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 AAR2Q9Y312 384 aaKnown RBP6.99□□□□□ -1.29
YBX3-209ENST00000540747 ALG6Q9Y672 507 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 CACNA1CQ13936 2221 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 ABCA2Q9BZC7 2435 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 TRAV17A0A0B4J275 112 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 PJA2O43164 708 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 CBFA2T2O43439 604 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 SPOPO43791 374 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 AKR1B10O60218 316 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 CTSVO60911 334 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 GPC4O75487 556 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 ZRANB2O95218 330 aaKnown RBP eCLIP6.98□□□□□ -1.29
YBX3-209ENST00000540747 S1PR4O95977 384 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 PRR35P0CG20 571 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 PIM1P11309 404 aaPredicted RBP6.98□□□□□ -1.29
YBX3-209ENST00000540747 COX6A1P12074 109 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 TNNT1P13805 278 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 MST1P26927 711 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 PTPN7P35236 360 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 NSG1P42857 185 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 CA7P43166 264 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 PLOD1Q02809 727 aaPredicted RBP6.98□□□□□ -1.29
YBX3-209ENST00000540747 KLC1Q07866 573 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 SPARCL1Q14515 664 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 GRM7Q14831 915 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 RBBP7Q16576 425 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 DNAJC21Q5F1R6 531 aaKnown RBP6.98□□□□□ -1.29
YBX3-209ENST00000540747 ZNF449Q6P9G9 518 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 RPTNQ6XPR3 784 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 NAPRTQ6XQN6 538 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 LINC00696Q6ZRV3 163 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 SHISA6Q6ZSJ9 500 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 HOOK3Q86VS8 718 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 VRK3Q8IV63 474 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 SLC22A15Q8IZD6 547 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 LMNTD1Q8N9Z9 388 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 OR1N1Q8NGS0 311 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 CCDC110Q8TBZ0 833 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 ACTL9Q8TC94 416 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 DENND1AQ8TEH3 1009 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 HAS2Q92819 552 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 C10orf90Q96M02 699 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 RNF32Q9H0A6 362 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 SOX17Q9H6I2 414 aaPredicted RBP6.98□□□□□ -1.29
YBX3-209ENST00000540747 RUBCNLQ9H714 662 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 NHEJ1Q9H9Q4 299 aaPredicted RBP6.98□□□□□ -1.29
YBX3-209ENST00000540747 ABHD10Q9NUJ1 306 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 IL1RAPL1Q9NZN1 696 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 IMPACTQ9P2X3 320 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 EFR3BQ9Y2G0 817 aa6.98□□□□□ -1.29
YBX3-209ENST00000540747 MRPS2Q9Y399 296 aaKnown RBP6.98□□□□□ -1.29
YBX3-209ENST00000540747 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.98□□□□□ -1.29
YBX3-209ENST00000540747 ZNF469Q96JG9 3925 aaPredicted RBP6.97□□□□□ -1.29
YBX3-209ENST00000540747 LOC102723996A0A087X1L8 192 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 OR51F1A6NGY5 319 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ISM1B1AKI9 464 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 H7C0C1 242 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 QSOX1O00391 747 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 OR1I1O60431 355 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 NRP2O60462 931 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 MFAP3LO75121 409 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 WISP2O76076 250 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 USP1O94782 785 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 FKBP9O95302 570 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 FTH1P02794 183 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 SERPINA7P05543 415 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ZGLP1P0C6A0 271 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ATXN8OSP0DMR3 200 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ACPPP15309 386 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 AGAP20933 346 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 CD9P21926 228 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ALAS2P22557 587 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms