RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 HNRNPA1L2Q32P51 320 aaKnown RBP9.29□□□□□ -0.92
LCOR-209ENST00000540664 PLA2G4EQ3MJ16 856 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 BCL7AQ4VC05 210 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 SLC44A4Q53GD3 710 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 FAM78AQ5JUQ0 283 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 FRG2Q64ET8 278 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 ADGRD2Q7Z7M1 963 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 FBXO15Q8NCQ5 510 aaPredicted RBP9.29□□□□□ -0.92
LCOR-209ENST00000540664 ZNF548Q8NEK5 533 aaPredicted RBP9.29□□□□□ -0.92
LCOR-209ENST00000540664 VN1R2Q8NFZ6 395 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 WDR20Q8TBZ3 569 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 SMG7Q92540 1137 aaKnown RBP9.29□□□□□ -0.92
LCOR-209ENST00000540664 TFAP2CQ92754 450 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 ARRDC3Q96B67 414 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 MTFMTQ96DP5 389 aaKnown RBP9.29□□□□□ -0.92
LCOR-209ENST00000540664 CCDC138Q96M89 665 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 NSMCE2Q96MF7 247 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 ASB16Q96NS5 453 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 FRG2BQ96QU4 278 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 CENPKQ9BS16 269 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 C9orf16Q9BUW7 83 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 YIPF3Q9GZM5 350 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 PAIP1Q9H074 479 aaKnown RBP9.29□□□□□ -0.92
LCOR-209ENST00000540664 KCNH6Q9H252 994 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 GULP1Q9UBP9 304 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 ITM2BQ9Y287 266 aa9.29□□□□□ -0.92
LCOR-209ENST00000540664 KRT87PA6NCN2 255 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 OTOL1A6NHN0 477 aaPredicted RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 ERN1O75460 977 aaKnown RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 PRSS23O95084 383 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 RASAL1O95294 804 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 NFATC1O95644 943 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 TFAP2AP05549 437 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 CDH1P12830 882 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 AMD1P17707 334 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 SDC1P18827 310 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 MAPK1P28482 360 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 PTPN6P29350 595 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 SLC6A11P48066 632 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 NEK2P51955 445 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 METAP1P53582 386 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 POLE2P56282 527 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 CYP4F3Q08477 520 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 CSTF3Q12996 717 aaKnown RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 CHIT1Q13231 466 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 GPM6BQ13491 265 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 EIF4HQ15056 248 aaKnown RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 ACOX1Q15067 660 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 C9orf50Q5SZB4 431 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 XKR5Q6UX68 686 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 MSANTD1Q6ZTZ1 278 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 RBM23Q86U06 439 aaKnown RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 CALHM3Q86XJ0 350 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 CBR4Q8N4T8 237 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 OR56A3Q8NH54 315 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 ATL1Q8WXF7 558 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 TMEM159Q96B96 161 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 APIPQ96GX9 242 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 METTL2AQ96IZ6 378 aaKnown RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 SH3GL1Q99961 368 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 ATG10Q9H0Y0 220 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 IKZF5Q9H5V7 419 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 SPATA6Q9NWH7 488 aaPredicted RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 STOX2Q9P2F5 926 aaPredicted RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 C2orf16Q68DN1 1984 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 TCF20Q9UGU0 1960 aaKnown RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 A0A096LPI6 279 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 EDDM13A0A1B0GTR0 161 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 FAM149AA5PLN7 773 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 SAC3D1A6NKF1 404 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 H0YIV9 168 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 KPNA3O00505 521 aaPredicted RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 ANXA6P08133 673 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 TACR1P25103 407 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 MAP4P27816 1152 aaKnown RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 GZMMP51124 257 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 C21orf58P58505 322 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 DPTQ07507 201 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 ABRQ12979 859 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 MTAPQ13126 283 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 POM121L1PQ3SYA9 428 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 SYTL3Q4VX76 610 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 TMTC4Q5T4D3 741 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 ATG9BQ674R7 924 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 AGTRAPQ6RW13 159 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 THOC6Q86W42 341 aaKnown RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 LILRA3Q8N6C8 439 aaPredicted RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 C12orf76Q8N812 135 aaPredicted RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 SMARCD2Q92925 531 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 C11orf24Q96F05 449 aaPredicted RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 OR4K3Q96R72 315 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 OR52E6Q96RD3 313 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 FAM129BQ96TA1 746 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 MRPS26Q9BYN8 205 aaKnown RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 OSBPL6Q9BZF3 934 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 TMEM245Q9H330 911 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 KAT8Q9H7Z6 458 aaKnown RBP9.28□□□□□ -0.92
LCOR-209ENST00000540664 PIDD1Q9HB75 910 aa9.28□□□□□ -0.92
LCOR-209ENST00000540664 PPT2Q9UMR5 302 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms